KEGG   Bombyx mori (domestic silkworm): 101739679
Entry
101739679         CDS       T02817                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101739679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101739679
Enzymes [BR:bmor01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101739679
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101739679
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 101739679
NCBI-ProteinID: XP_004925682
LinkDB
Position
6:complement(10802380..10807704)
AA seq 998 aa
MSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTDVL
LKQRPNTKRVESINDIGNWDNISKEDQELILKKLNETEKLYAEKHSGKYTAKLIENKSLG
SIKKNSVKSEPDTTDSGNIVEDNKFSTFIELCKRIAKVDAYTEKTAAVNSFFTKGIEKDN
FKGDLGLWCKLLLPQVTKRVYNLKSKQLVKLFSKIFNIDHDDMLTDLEQGDVANTIQRFF
STSKVVQPASFSSLTIHNIEDFLENLSTLTKEEEQIYHFKKIVKKCTLDDMKMLIRLIKG
DLRINAGPKHILEGVHPDSYNVFQTSRDLNMVLDRVLSKNNSSNDKGVSHKAVSAKLTLM
TPVLPMLAEACKSIEMAMKKCPNGMYSEIKYDGERVQIHKKGTEFKYFSRALKPVMAHKV
SLFKEHLPKAFPKGEDMILDAEVLMVDVCTGKPLPFGTLGVHKQSEFKDAEVCLFIFDCL
YYNGEVLMNEPIWKRKKFLEENMIEVKNHVMLSELQFIEKPSDLAKMIAEVLQLGLEGLV
LKDRESIYEPGKRHWLKVKKDYLFDGAMADTADLVVLGAWFGTGKKGGMMSVFLMGCLDK
YKNKWVTVTKVHTGHDDSTLERLQKELGPLMLKISQDSNKVPSWLDCKKGMVPDFVALDP
KKQPVWEITGTELTKANQHTADGISVRFPRVTRIRTDKDWQSATNLDELKHLYKTSKETS
DVSLLNKLAASASGIETTNKKTKASPKKQNKLDNFLKKEPKQSPSKKSPDSPLVKLETKA
SNKNKLNGSNSDLSYDETDSKREIKRRKRHLNISEGTLSESYEETNKNKKKNTEETKKSE
ETETDVKREMKRKKRDLDSSQETIAELNETPAKVKRKDKTTVSGNKLYPDNPLPDAFKDK
ILSLYPDLISFSEDERKHFVRHWIAYGGVLVKSMRSANVDFVVHNNNCITYKEMQRLKEE
LRQGVRHVTKNWLIRCINEVALCDTTKYAVTVIPQKLY
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgtccgattcaacaccgttttacgtagatcgagccaaaggtggtagggcagcatgtaaa
ttatgtaaaggcaactgtcctagtggtgaactacgtatggccaaacttgtaccgagcccg
tatggcgataatcaatccatgaaatcttggtatcatgttcattgttttactgacgtattg
ttaaagcaacgccctaatactaaacgagttgaatccatcaacgacattggtaactgggac
aatattagtaaggaagatcaagaattgatactaaaaaaattaaacgaaactgaaaaattg
tacgcagaaaaacacagtgggaaatacacagcgaaactaattgaaaacaaatctttaggc
tccataaagaaaaatagtgttaaaagtgagccagacactactgatagtggtaacattgta
gaagataataaatttagtacttttattgaattatgtaaaagaattgcaaaagtcgatgca
tatactgaaaagactgctgctgttaattctttttttacgaaaggaatagagaaagataat
tttaaaggagatcttggtttgtggtgtaaattactattacctcaagtaaccaaaagagtt
tataatttaaagagcaaacaattagttaagctcttctcaaaaatattcaatattgatcac
gatgatatgttaacggatctagaacagggagatgtggcaaatacgatacagagatttttc
tcaacatcaaaggtagtgcaacctgcttcctttagttcacttacgatccacaacatagaa
gatttcctagaaaacttatctacattaacaaaagaagaagaacaaatttaccacttcaaa
aaaattgtgaaaaaatgtacattagatgatatgaaaatgttgatacggttaataaaagga
gatctaagaattaatgctggaccaaagcatatcttggaaggagtgcatcccgattcatat
aatgtttttcagacgtcaagagaccttaatatggttcttgatcgggttttgtcaaagaat
aatagttcaaatgacaagggtgtgagccacaaagctgtttcagcaaaactgacattaatg
actccagttttgcctatgttagctgaagcatgcaaatcaattgaaatggcgatgaaaaaa
tgtccaaacggtatgtactctgaaattaaatatgatggggagagagttcagatacataaa
aaaggtacagaatttaaatacttttctagagcattaaaacctgtgatggcacataaagta
agcttatttaaggaacatttgcctaaagcttttcctaaaggagaagatatgatattagat
gctgaagttttgatggtggatgtgtgtactgggaagcccttaccatttggtacattgggc
gtacacaaacaatctgaatttaaagatgcggaagtatgtttgtttatatttgattgtctc
tattataatggagaagtattgatgaatgagccaatttggaaaagaaagaagtttcttgag
gaaaatatgattgaagtaaaaaatcatgtcatgttatctgaattacagtttattgagaag
ccatcagatttagctaagatgattgctgaggttctacaactgggtctggaaggactggta
ctaaaagaccgtgaatctatatatgagccgggaaaacgtcattggttgaaagtgaagaaa
gattatctctttgatggagcaatggctgacactgcagatcttgttgtacttggagcttgg
tttggtacaggtaagaaaggcggaatgatgtcagtattcttgatgggctgtttggataag
tacaaaaataagtgggtaactgtaaccaaagtgcatacgggacatgatgatagcacgctc
gagagacttcaaaaggagttaggacctttaatgttgaagatttctcaagacagtaataaa
gtcccgtcatggttagactgtaaaaagggtatggtgccggatttcgtcgctttagatcct
aagaagcaaccagtttgggaaattacaggtaccgagttaacaaaagcaaaccaacacaca
gccgatgggatatcagtgaggttcccaagagtcacaaggattcgaacagacaaagactgg
cagtccgccacgaacttggatgaactgaaacatttatacaaaacttcgaaagaaaccagt
gacgtctcattattaaacaaattggctgcttcagcttctggtattgaaacaacgaacaaa
aaaacgaaggctagtccgaagaaacaaaataaattggacaatttcttaaagaaagaacca
aaacagagtccttcaaagaaatctccagatagtcccctagtaaagttagaaacaaaagcg
tcgaacaaaaataaactgaatggttctaattcggatttgagttacgatgagactgattct
aaaagggaaatcaaaagaaggaaaagacatttaaatatttcggaaggaaccctctctgaa
tcttatgaggaaacgaataagaataagaaaaagaacaccgaagaaacaaagaagtcggag
gagactgaaacggatgtcaaaagagaaatgaaaagaaagaaaagagatttagacagttct
caagaaactattgcagagttaaatgagacgcctgcaaaagtaaagagaaaagacaaaaca
acagttagtggaaataaattataccccgacaaccctttgccggacgcgttcaaagataaa
atattaagtttatatcccgacttaatatctttttcggaggacgaaagaaaacattttgtt
aggcattggattgcgtacggaggtgttcttgtgaaatcgatgcgatctgcgaacgttgat
tttgtcgtacataataacaattgtattacatacaaggaaatgcaaaggttaaaagaagaa
ttgcgtcaaggcgtaaggcatgttacgaaaaattggttaattaggtgtataaatgaggtt
gcactatgtgatactactaaatatgcggtaacggttatacctcagaaattatattaa

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