Peribacillus muralis: ABE28_016920
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Entry
ABE28_016920 CDS
T05340
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bmur
Peribacillus muralis
Pathway
bmur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABE28_016920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmur03400
]
ABE28_016920
Enzymes [BR:
bmur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABE28_016920
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABE28_016920
DNA repair and recombination proteins [BR:
bmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABE28_016920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DZR
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AOH56046
UniProt:
A0A1B3XS49
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Position
complement(3476846..3477676)
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AA seq
276 aa
AA seq
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MPELPEVETVRRTLEQLVLGKEIKEVSVFWPKIIKAPEPIEQFQDALKGQTIQAIGRRGK
FLIFTLDEYSMVSHLRMEGKYGVHQKEEPYDKHTHVIFTFTDDSELRYRDVRKFGTMHLF
AKGEELERLPLLHLGPEPLSVDFTVEGLRAKLARTNRKIKPVLLDQTVVVGIGNIYVDES
LFRSGIHPERIASSLSLEEIEKLHAEIIATLGEAVEKGGSTIRSYVNSQGQIGMFQLELN
VYGRKGESCKTCGTPLEKLVVAGRGTHICPVCQPLI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtggaaacagtcagaagaacgttagagcagctcgtacttgga
aaagagattaaggaagtgtccgttttctggccaaaaatcattaaagcgcccgagccaatc
gaacagtttcaggatgcattgaaggggcagacgatccaagcgatcggcaggcggggcaag
ttcctcattttcaccttggatgaatattcgatggtttcgcatttaaggatggaaggcaaa
tacggggtgcatcaaaaggaagaaccgtatgataaacatacacatgtgattttcacattc
acggatgacagcgaactccggtaccgcgatgttcgtaaattcggcacgatgcacttattt
gccaaaggggaggaattagagcgactgccattgctgcatttaggacctgaaccgttatcg
gtggatttcactgtcgaggggctcagggctaaattggcaagaaccaacaggaaaatcaag
ccggtgctccttgaccaaacggttgtcgtcggaatcgggaatatatatgtggacgagtcg
ttattccgttccggcatccatcccgagaggatagcttcctcgctttccttggaagaaatc
gaaaagcttcatgctgaaatcattgccacactaggtgaggctgtcgaaaagggaggaagc
acgattcgttcatatgtcaactcccaagggcaaatcggcatgtttcagctcgagctgaat
gtctatgggcgcaagggcgagagctgcaaaacatgcgggacgccacttgaaaagcttgtt
gtagcagggcgcggcacacatatttgcccagtatgccagccgctaatttag
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