Brugia malayi (filaria): BM_BM2055
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Entry
BM_BM2055 CDS
T01050
Symbol
Bm2055
Name
(RefSeq) ATP dependent DNA ligase C terminal region family protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BM_BM2055 (Bm2055)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmy03400
]
BM_BM2055 (Bm2055)
Enzymes [BR:
bmy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BM_BM2055 (Bm2055)
DNA repair and recombination proteins [BR:
bmy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
BM_BM2055 (Bm2055)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
PNKP_ligase
TauD
Motif
Other DBs
NCBI-GeneID:
6096732
NCBI-ProteinID:
XP_042933511
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSDSDETDEEPSDDIDINSRKEDEQEVENAAASSLEEEISKNFKYATLCKYLDHMQKIHF
KNKLGKERVLKALVTKWTANATKYTNDTVSFYPVLRIMANSLDRRKFRMKSKRIISKVCQ
VLLLPPKTKKELLQIDSKSADQSIMKLAEEVSMRNSATAKRELSLFDVNDSLCKITEREI
SDAELEKLLKACTTMREVYWLLQVLVRKIERSLKVTSSSLVSWIHPNGATLYQSGVSLRE
ICDLAAEGKMTNNSSMLFRRFEPMLLSRIRHGTGDVYDKLVHFCGQEFYVELKYDGEHFL
LHRGTNCEMRYYSRVQNDFTNTISPVLDHRINPYFSPSLESCILDTELLLWDIIDKKFVG
HNTLASDGRIYDVKALRSDGAVEPSVAVFDILFLNGKSLMDVPLSERIALLQSGNVLQKQ
DETKIFVSKFTVVKTREEFASLYEEAVMNGQEGVVAKKMNSIYKTGVRQMANGWFKVKPF
HLGDETLDLAVVGVDLGRNNKISSYCLATLRDGKFFMVGKVGTGLDDTTRSFLKSRLTRG
HGFFKSDKVPNWIHNDYTTSDLPSHFVNQNNIQVVEIRAKGLRNGRLYAPTLRTYRDDKY
VKDIDQYQAFLDFDKNLRLDSIKNAQSVTNTKRHTTNVHVLEQYQTKKARIEEINQDLKE
KQICILRGTSSVTTQDLQAIIDSFGGIHVANPGPKTLFVVTGEPKHVKSKSIIKSNKYNV
VSADWLIACKHMGKVIPITKKETVHVVDDSLYSLFGDDKVSENSIMLSNSTAYTVASVSA
LLDKIKVPKRKKPLAAEEALRKQLFMDDKFNRFYGQTFYLHENLTKIQKIYAQILLRMHG
ADLSTNKSSAVTHIVVPDRKKAYDNLLKKMATVDICWLENTLDLL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagtgatgaaactgatgaagaaccatcagacgacattgatatcaactccaga
aaagaagatgaacaagaagtggaaaatgctgcggcgagcagtttggaagaagaaatttct
aaaaatttcaaatatgcaacattgtgcaagtacttagatcatatgcagaaaattcatttc
aaaaataaattaggcaaggaacgagtgttgaaagcattagtgacaaaatggacagcaaat
gcaactaaatatacaaatgataccgttagtttttatccggttttacgtattatggcaaat
tcattggatcgacgaaaatttcgcatgaaatcgaaacgaattatatcgaaagtatgccaa
gtgttgcttcttccgccaaagacaaaaaaggaattgttgcagatagattccaagagtgca
gaccagtcgattatgaaacttgcagaagaagtttcgatgcgaaattcagctactgctaag
cgtgaactgtctctttttgatgtgaatgattcgctgtgcaaaataacagaaagagaaata
agtgacgcagaactagagaagcttttaaaagcttgtacaacaatgcgcgaagtctattgg
cttttgcaagtattggttcgtaagattgaacgctctttaaaggtaacatcttcaagttta
gtaagctggatacatcccaacggagctacattatatcagtctggagtgagtttgcgggaa
atatgtgatcttgctgcggaaggtaaaatgacaaacaattcgagcatgctttttcgtcgt
tttgaaccaatgttattatcaagaatcagacacggtactggagatgtttacgacaaactg
gttcatttctgtggccaagaattttatgtggaattaaaatatgatggtgaacatttctta
ttgcacagaggaacgaattgcgaaatgcggtactactctcgagttcaaaacgactttaca
aataccatatcaccagtgcttgatcatagaattaatccgtatttttcgccatcacttgaa
agctgtatattggacactgaattattactatgggatattatcgacaaaaaattcgttgga
cataatacgctagcatcggatggtcgcatttatgatgtgaaagctctcagatctgatggt
gcagtagagccaagtgttgcggtatttgatattttatttttaaatggaaaatcattaatg
gatgttccattgagcgaaagaattgctcttcttcaaagtggtaatgttttgcaaaaacaa
gacgaaacaaaaatattcgtatcgaagttcactgttgtcaaaacgagggaagaatttgct
tcactgtatgaagaagctgtaatgaatggtcaagagggcgttgtggcaaagaaaatgaat
tctatttataaaacgggcgtgcgtcaaatggcaaatggttggtttaaggtaaaaccgttt
catctgggcgatgaaacattagatcttgcagttgttggtgtcgatcttggtaggaataat
aaaatcagtagttattgtttggcaacgcttagagatggtaagttcttcatggttggtaaa
gtaggaacaggattggatgatacaactcgttcatttcttaaaagtcgtttgacacgaggc
catggtttcttcaaaagtgataaggttccaaattggattcataatgattacacgacaagc
gatttgccaagtcattttgtaaatcagaataacatacaagttgttgagattcgagctaaa
ggattaagaaatgggagattatatgctccgactctgaggacatatcgagatgacaaatat
gttaaagacatcgatcagtaccaagcatttttagactttgataagaatttacgtctagat
agtataaaaaatgcgcaaagcgtaacaaatacaaaaagacatacgacaaatgtacatgta
cttgagcaatatcaaactaagaaagcgcgtatcgaggaaataaatcaggatttaaaagag
aaacaaatttgtatcttaagaggtacctctagtgtaacaacgcaggatctgcaagcgatc
attgattcatttggtgggattcacgtcgctaatccaggtcctaaaacactttttgttgta
actggagagcccaaacatgtgaaatcaaaatcgattattaaaagtaacaaatataatgtt
gtcagcgcagactggcttatagcatgtaaacatatgggcaaagtcatacctattacgaag
aaagaaactgttcacgttgttgacgatagtctttattctttatttggagatgataaagta
tcagaaaattccatcatgctatcgaattctactgcatatacagttgcaagtgttagtgct
ttgctggacaagataaaagtacctaagcggaaaaaaccgttagctgctgaggaagcatta
agaaaacaactatttatggatgataagtttaatcgattttatggtcaaacattttattta
catgagaacttaacgaaaattcaaaaaatatatgctcaaattttattgcgaatgcacggt
gctgatctgagtacaaataaaagcagtgctgttactcatattgttgttcctgacaggaaa
aaagcgtatgacaacttgttaaagaaaatggccactgttgatatttgctggctggagaac
acactcgatttactataa
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