KEGG   Brugia malayi (filaria): BM_BM8923
Entry
BM_BM8923         CDS       T01050                                 
Symbol
Bma-hda-3
Name
(RefSeq) histone deacetylase 1 (HD1), putative
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bmy  Brugia malayi (filaria)
Pathway
bmy03082  ATP-dependent chromatin remodeling
bmy03083  Polycomb repressive complex
bmy04213  Longevity regulating pathway - multiple species
bmy04330  Notch signaling pathway
bmy04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:bmy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    BM_BM8923 (Bma-hda-3)
   03083 Polycomb repressive complex
    BM_BM8923 (Bma-hda-3)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    BM_BM8923 (Bma-hda-3)
   04350 TGF-beta signaling pathway
    BM_BM8923 (Bma-hda-3)
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    BM_BM8923 (Bma-hda-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bmy03036]
    BM_BM8923 (Bma-hda-3)
Enzymes [BR:bmy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     BM_BM8923 (Bma-hda-3)
Chromosome and associated proteins [BR:bmy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     BM_BM8923 (Bma-hda-3)
   HDAC complexes
    Sin3A-HDAC complex
     BM_BM8923 (Bma-hda-3)
    BRAF-HDAC complex
     BM_BM8923 (Bma-hda-3)
    REST complex
     BM_BM8923 (Bma-hda-3)
    SHIP complex
     BM_BM8923 (Bma-hda-3)
    MiDAC complex
     BM_BM8923 (Bma-hda-3)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     BM_BM8923 (Bma-hda-3)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    BM_BM8923 (Bma-hda-3)
  Chromatin remodeling factors
   NuRD complex
    BM_BM8923 (Bma-hda-3)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 6097786
NCBI-ProteinID: XP_042935732
LinkDB
Position
Unknown
AA seq 484 aa
MIIGMAIQAHSKIRVAYYYDGDVGNYYYGQGHPMKPHRIRMAHNLILNYGLYRRMEVYRP
HVATFEEMTKYHSNDYLTFLKNARPEDTIDSNTAKARQRYNVGEDCPVFDGMYEFCQTSC
GGSLAAAAKLNKKQADITINWMGGLHHAKKSEASGFCYTNDIVLAILELLNHHQRVLYVD
IDVHHGDGVEEAFYTTDRVMTVSFHKFGEYFPGTGDIQDIGSGRGKYYAVNCPLHDGIDD
DTYQSIFRAVMEQVMLSYQPSAIVLQCGADSLVGDRLGCFNLSLKGHGKCVEFMKKFNLP
LLLLGGGGYTIRNVARCWAYETAIALDVEISNELPYNDYFEYYSNDFKLHIIPSNMTNLN
TPDYLQKMQSTIFEHLRHLPYAPSVQMQPIKDEITDETVSKSSYKCFSILENCVEGDNEF
YEEHSIKPNRNERSHNLSAEDLSPETKRIRISSPKSPKSPKSPKSFLGSKFSKSPKYSRS
TSDS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgattattggtatggctattcaggctcatagcaaaatcagggttgcatactactatgat
ggagatgttgggaattactactacggccaagggcatccgatgaagccacacagaattcgg
atggcgcataatctcattctcaattatggtctttatcgacgaatggaagtttatagaccg
catgtggcgacatttgaggaaatgacgaagtatcacagtaacgattacttaacattttta
aaaaacgcacgaccagaagataccattgatagcaatacagcgaaagctcgtcaacgatac
aatgttggcgaagattgccctgtttttgacggtatgtatgaattttgccaaacttcttgc
ggtggctctcttgccgcagcagcgaaacttaacaaaaagcaagcagatattaccataaat
tggatgggtggtttacatcatgccaagaaaagtgaagcttctggattctgctacacgaat
gatattgtcttagcaattcttgagcttctcaatcatcatcagcgtgttttatatgtcgac
attgatgtccatcatggtgatggtgtcgaagaagcattctacacaacagatcgtgtaatg
accgtttcgtttcacaaatttggtgaatattttccaggtactggagatattcaggatatc
ggctcaggtcgaggaaaatattatgctgtaaattgtccattgcatgatggtattgatgat
gacacgtatcaaagtatattcagggcagttatggagcaggttatgctgtcttaccagcca
tcagctattgtcttacagtgtggcgctgattcattagttggtgatagacttggatgtttc
aatctttctctaaaaggacatggcaagtgtgttgaattcatgaagaaattcaatttacca
cttttgttacttggtggtggcggttataccattcgtaatgttgcacgttgctgggcttat
gagacagctattgctttggatgttgaaatatcaaatgaattgccgtacaacgattatttt
gagtactactcaaatgatttcaagctccacatcatcccatcaaatatgacaaatctgaac
acacccgattatcttcaaaaaatgcagtcgacgatttttgaacatctgcggcatttacca
tacgctcccagtgtgcaaatgcaaccaataaaagacgaaatcaccgacgaaacagtgtcg
aaaagttcatataaatgcttctcaattctagaaaactgcgtggaaggcgataacgaattt
tatgaagaacatagcataaaaccaaatcgaaatgaacgatctcataatcttagcgctgag
gatttatctccagaaacaaaacgaattcggatctcatcaccaaagtctccaaaaagtcca
aaatctcctaaatcattcttaggttcaaagttttcgaagtctcctaagtattctaggtcc
acatcagattcatga

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