Brassica napus (rape): 106346441
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Entry
106346441 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 87F-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106346441
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106346441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106346441
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106346441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106346441
NCBI-ProteinID:
XP_013641224
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All DBs
Position
A6:complement(4718614..4721215)
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AA seq
576 aa
AA seq
DB search
MNQENAGYGDNQKLLHQGSGTIPALADEELMGEDDDYDDLYSDVNVGESFFQAHNQPQAP
VQVGGSIQAQNSTVSEPRMAVVSGGGVEGKYHNGISGPETRSDAYPPQGSSFGPKGMNVD
VQSNQPNKVNPQGSTSIVLNTHSFSGNAVNVPEPPPVHNAYGGAPQGAQQIPVSQTSVNP
SAMVNRSPTQPFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSK
GYCQVEFYDSAAAAACKEGMNGFVFNGKACVVAFASPETLKQMGANFTGRNQGQNQMQNR
RPLNEGMGRGNNNNNNNNNMNTQNGDGGRNFGRGGGFARGGQGMGNRGGHWGGAARGRGM
NNMANGAGAGPYGGPGLAGPAFGGMMHPQGMMGAGGFDPTFMGRGGGYGGFPGLAYPGMP
QPYPGVNPMGMVGIAPHVNPAFFGGAGMGTMGNAGMNGVHAGGMWNEASGGGGGGEEGGS
EYGGYEDENQEKEEKPSREKERSTTERDWSESSGGDRRHKSHREEKDSHREYKHRDSEEY
DRGQSSSKSRSRSRMSEDDHRSRSRDADYGKRRRGD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaaacgctggttatggagataatcagaagctacttcaccagggaagcggg
actattcctgctcttgctgatgaagagctcatgggagaagatgatgactatgatgatctc
tatagcgatgttaatgttggtgagagcttcttccaggctcataatcaacctcaagcaccg
gttcaagtgggtggaagtattcaagctcagaatagtactgtttctgaaccgagaatggca
gttgtatctggaggtggagttgaagggaagtatcataatgggatcagtggacctgaaaca
agatcagatgcttatcctccacaaggatcttcttttggacccaaagggatgaatgttgat
gtccagtccaaccaacccaacaaagttaatccacaaggatcaacatctattgtgttgaac
acgcatagtttttcagggaatgctgtgaatgtgcctgagcctcctcctgtgcataacgct
tatggtggtgctcctcaaggtgctcagcagattcctgttagccagacaagtgtgaatcca
agcgcaatggtgaacagaagccccacgcagccgtttgttgtggacaatgggaacaccatg
cttttcgtgggggagttgcactggtggacgacggatgcagagattgagagtgttctttct
cagtacggaagagtcaaagagatcaagtttttcgacgagagagttagcggtaaatccaaa
gggtattgtcaggttgagttttacgattcagctgctgcagctgcttgcaaagaaggaatg
aatgggtttgttttcaacggtaaagcgtgtgttgtagcctttgcttctcctgagacgctg
aagcagatgggagctaacttcactgggaggaaccaaggacaaaaccaaatgcaaaacaga
aggcctttgaatgagggaatgggaagaggcaacaacaacaataacaacaacaacaacatg
aatacgcaaaatggagacggtggaagaaactttgggagaggtggtgggtttgcacgtggt
ggccaaggaatgggaaaccgtggaggtcattggggtggtgcagcgagaggcagagggatg
aacaacatggctaacggtgctggtgctggaccgtatggcggccctggactcgctggtcca
gcgtttggtggtatgatgcatccacagggtatgatgggagctggtgggtttgatcctaca
ttcatgggtcgtggcggcggttatggagggtttcctggtcttgcttaccccgggatgcct
cagccttatcccggtgttaatccgatgggaatggttgggattgctcctcatgttaatcca
gcatttttcggcggcgcggggatgggaacgatgggtaacgcagggatgaacggagttcat
gcaggagggatgtggaacgaggctagtggaggaggtggtggtggtgaagagggtggttct
gaatacggtgggtatgaagatgaaaaccaagagaaagaagagaagccatcacgtgagaaa
gagcgttctaccacggaacgtgactggtctgagagcagtggtggtgatagaagacacaag
agtcaccgtgaagagaaagatagtcaccgcgagtataagcaccgtgattctgaagagtat
gatagaggacagtcttcttccaagtctcgaagcagatcaagaatgtcggaagatgatcat
aggtccaggtcaagagatgcagactacggaaagcgaaggcgaggagactga
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