Brassica napus (rape): 106346688
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Entry
106346688 CDS
T04128
Name
(RefSeq) vacuolar-sorting protein BRO1
KO
K12200
programmed cell death 6-interacting protein
Organism
bna
Brassica napus (rape)
Pathway
bna03250
Viral life cycle - HIV-1
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106346688
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106346688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106346688
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106346688
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
106346688
Exosome [BR:
bna04147
]
Exosomal proteins
Proteins found in most exosomes
106346688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
106346688
NCBI-ProteinID:
XP_048614065
LinkDB
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Position
C5:complement(7628939..7632833)
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AA seq
856 aa
AA seq
DB search
MASSALSNLMLAIHEKKTSSVDLYRPLRNYITFTYSEREAQLLEDDLETLNQLRSDVERV
PDPSPSARRDLLISYYKALCLVETRFPISPEKHHVNAVSFLWHDTFKQKQKATQQNIHLE
KAAVLFNLGATYSQIGLGHDRTTVDGRRQASHAFIGAAGAFAYLRDNESTKASIGQSSTT
VDVSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKIARQVGIYYEEALAALTAPPL
KDHFEKGWISHVQLKAALFYSEACYRYGMELHEKEEIAEEIARLRSGSSRLAEAKKSSRG
APAQLIEAMNKLEASINCNLDRAVKENDRVYLMRVPSPASLSPLPTFSMVKPMNMTEILD
ASKEKMFAILVPDSSAKALSRYTEMVDDVIRTQAERLQQASELTRVRLKEMDLPDSILAV
DGHSTLPADLREDVEAVQISGGPASLEAELQQLRDLKRVNQELLVHTEELLQKEATEDTQ
FRSQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQAGESDVKIERSVRENSALMSILDRRP
IESAIPSLAKPMMSLDATEDAIVGTLKQSLRQLENLGAQRAGLEDMLKEMKRKDDILPKL
MTITGSYEDMFRKEISKYDHICEDISQNIEVQEQLLRQIQAQNEEFSTVFNLEDYKASRE
KCYNQIQAAISKYREIKENVNEGLKFYVTLQDAITNVKQQCSDFVMTRSIQCREMIEDVQ
RQMSGLSFQDRRNSGPYPSVHQPTATSSPPPQETHNPSHPHPQAPYYRPPEQLSRPGYSI
PPYGPPPPYHTPHGQAPPQPYPPQAPQQQQPYPSWQQGSYYDPQGQQPRPPYTAPNPYLH
PPQPQPPHQGSGYYRH
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcggcgctctctaatctgatgctcgcgatccacgagaagaagacgagctca
gtcgatctctaccgtcctctccgcaactacataaccttcacctactccgagcgcgaagct
cagcttctagaagacgatctcgaaaccctcaatcaactccgctccgacgttgaacgcgtc
ccagatccgtctccctccgcccggagagaccttctcatctcctactacaaagccctatgc
ctcgtggagacgcggtttccaatctcccccgagaagcaccacgtcaacgccgtctctttc
ctatggcacgataccttcaagcagaagcaaaaggccactcagcagaacattcatctggag
aaagccgccgttctcttcaacctcggcgctacttacagccagatcgggctcggtcacgat
cgcaccaccgtggatgggcgccgtcaggcttcgcatgcgttcatcggtgcggcgggggcg
ttcgcgtacctgagggataacgagtccactaaggcgtcgatcgggcagagcagcaccacc
gtggatgtgtcggtggagtgcgtggggatgttggagaggctcatgttggctcaggctcag
gaatgtgtatttgagaataccattgctaaaggaagcactcctggtgtttgtgctaaaatt
gctagacaggttggtatatactacgaggaagctttggctgcgttaaccgctccaccattg
aaggatcattttgagaaaggctggatttctcatgtgcagctgaaagcagcactcttctat
agtgaagcttgttataggtatggaatggagttgcacgagaaagaggaaattgcagaagag
atagctcggctgaggagcggaagcagccgtttggcagaggcgaagaagtcttcgagagga
gctcctgctcagcttatagaagccatgaacaaactagaggcgagcattaattgcaatttg
gatagggctgtcaaggaaaacgatagagtgtacctcatgagggttccgtctcctgcttct
ttgtctccacttccgactttctcaatggttaagccaatgaacatgactgagatattggat
gcaagcaaggagaagatgtttgccatccttgttccggacagcagtgcgaaagctctctct
agatacactgagatggtggatgatgtgattaggactcaggcggagaggttacagcaagcg
agcgagctaactcgggtgaggctcaaagagatggatcttcctgattctattcttgctgtg
gatggtcactcaactcttccggctgatcttagagaagatgtagaagctgttcagatcagt
ggtggtcctgctagcttggaagctgaactccagcaacttagagatctgaagagggttaat
caggagttgttggtgcacaccgaagagcttttgcagaaagaagcaactgaagatactcaa
tttagaagccaatttgggactcggtggactaggcctcagtctagcactctgacaaagaac
ttgcaggataggttaaatcgttttgcagccaatttgaaacaagctggagaaagtgatgtg
aagattgagcgttctgtgagagagaattccgccctcatgtcaattcttgatcgaaggccg
atagaatctgccatcccatctctagctaagccaatgatgtctctggacgcaacggaggat
gccatcgtgggaactctgaagcagagtctgaggcaactggaaaatcttggtgctcagcgc
gcaggtcttgaagacatgctcaaagagatgaaaagaaaggatgacatactgccaaagctg
atgacgattacaggttcatatgaagatatgttcaggaaagagatatcaaagtatgatcac
atctgtgaagatatttctcaaaacattgaagttcaagaacagttgttgaggcaaattcag
gctcaaaatgaagagttctcaactgtttttaatcttgaagattataaagcatccagagag
aagtgctataaccagattcaagcggctatatccaagtatcgagagatcaaggaaaatgtc
aatgagggcttgaagttctatgtcactctccaagatgcaatcacgaatgtcaaacagcaa
tgcagtgattttgtgatgacgaggagtatccagtgccgagaaatgattgaagatgtgcaa
cgacagatgtctggtctgagttttcaggatcgtagaaactccggtccatacccatctgta
catcagccgacagctacaagttcgcctcctccacaagaaactcataatccatctcatcct
cacccacaagcaccatactatagaccgcccgaacaactgtcaagacctggctactctatc
ccaccctatggtccacctcccccgtaccacacacctcatggccaggcgccaccacaacca
taccctcctcaggccccgcaacagcaacagccttatccatcttggcaacaaggctcgtac
tatgatcctcagggacagcagcctcggcctccttataccgccccgaatccgtacctacac
ccgcctcagcctcagcctcctcaccaaggcagtggatactacaggcattga
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