Brassica napus (rape): 106348836
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Entry
106348836 CDS
T04128
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106348836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106348836
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106348836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
106348836
NCBI-ProteinID:
XP_013644105
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All DBs
Position
C2:31718986..31721974
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AA seq
299 aa
AA seq
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MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDPRDADD
AIHGRDGYDFDGHCLRVELAHGGRRSSNDARSSYGRDGGDRGRGPSRRSEFRVLVSGLPS
SASWQDLKDHMRKGGEVCFSQVYRDGRGTTGIVDYTSYEDMKYAIKKLDDTEFRNAFSRG
YVRVREYDSRRDSKSPSRGRSYSKSRSRSRSRGRSHSRSRSRSRSPKAKSSRRSPAKSTS
RSPRSRSKSRSPPPRGSRSRSTSPLPFVQKEASKSPSKLSPAKSPMRSRSKSRSRSPAR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcaagtagaactatatacgtggggaaccttccaggcgatatccgggag
agagaggttgaagatttgttcagtaagtatggacctgttgttcaaatcgatctgaagatc
ccaccaaggcctcctggctatgccttcgtcgagtttgaggatcctcgggatgctgatgat
gcaattcatggtcgtgatggatatgactttgacggccattgtttacgggtggagctagca
catggtgggaggcgttcatctaatgatgctcgtagtagttacggtcgtgatggtggagac
cgtgggcgtggaccatctaggagatctgagttccgtgttcttgtgtcaggtttgccttca
tctgcttcctggcaagacctcaaggatcacatgcgtaaaggaggagaagtctgtttctct
caagtctaccgtgatggtagaggtacaactggaattgtagattacaccagctacgaggac
atgaagtatgcgattaaaaagctcgatgacacagagtttaggaatgcgttttctcgtgga
tatgtccgggttcgagaatatgattcaaggagggattcgaaaagccccagccgtggaaga
tcttattctaaaagccgtagccgtagtcgcagccgtgggcggagccacagtcgtagccgc
agcaggagcaggagcccaaaggctaaatcttcccgtagatcgcctgcaaaatctacgtca
agatcccctcgttcccgctcaaagtcaaggtcaccacctccgcgaggatctcgttcaagg
tcaacatctcctctgccttttgttcagaaggaagcaagtaagagccctagcaagctgagt
ccagccaagagccctatgcgtagcaggagcaagagcagaagcaggagtccagctcggtaa
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