Brassica napus (rape): 106349075
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Entry
106349075 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase-like 7 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106349075
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106349075
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106349075
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106349075
NCBI-ProteinID:
XP_013644423
UniProt:
A0A078HQV5
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Position
C9:complement(26454510..26459442)
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AA seq
539 aa
AA seq
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MENSGYGRDGIYRSLRPTLVLPKDPNTSLVSFLFGNTSSYPTKPALVDSDTGDSLSFSQL
KAAVSRLAHGLLRLGIRKNDVVMIFAPNSHRFPLCFLAVTAIGGVFTTVNPSYTVNEVSK
QVKDCNPKIIFSVQELLDKVKTFDLPIVLLGQSDLDSSSKILPLNNVMELSEPVSDLPCV
DVKQSDTAALLYSSGTTGMSKGVELTHGNFIATALMVTMDQDLMGEYHGVFLCFLPMFHV
FGLSVVTYAQLQRGNAVVSMAKFDLERLLKNIEKYRVTQLWVVPPVFLALAKQSIVKKYD
LSSLKYIGSGAAPLGKDSMEECARNIPNVVLMQGYAMTETCGIVSMEDPRRGKRNSGSAG
MLASGIEAQVVSVESGKPQPPNQQGEIWVRGPNMMKGYLNNPEANKETIDENGWVHTGDL
GYINEDGNLFIVERLKELIKCNGFQVAPAELEGLLVSHPELLDAIVIPFPDVYAGEVPIA
FVVRSPNTTITEEDIQKFIAEQVAPYKRLRRVSFVSSVPKSLAGKLLRRELREQVRSKM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagaactccggctatggcagagacggcatttaccgatcacttcgtcctacccttgtc
cttcccaaagatcccaacacatctttagtctctttcctgttcggtaacacctcttcttac
ccgacaaagcctgcactcgttgactccgacaccggcgactccttgtccttctctcagctc
aaagccgccgtgtctagactcgcacacgggcttctccgtctaggcatccgcaaaaacgac
gtcgtgatgatcttcgcaccaaactctcaccggttccctctctgtttcctcgccgtaaca
gccatcggcggcgttttcaccaccgtgaatccttcttacactgtcaacgaggtttcgaag
caggtcaaggactgtaacccgaagatcatcttctccgttcaagaactgctcgacaaggtc
aagacttttgatctccccattgtcctactcggtcagagtgatcttgactcgagttccaag
atcctccctttgaacaacgtgatggagctgtccgagccagtttcggatctcccttgcgtg
gacgtcaagcaatcggacacagctgcactgttgtactcctccggaactacgggaatgagc
aaaggcgtggaactgactcatgggaacttcatagcaacggctttgatggtgacgatggat
caagatcttatgggagagtaccacggtgtgttcttgtgttttcttcccatgttccatgta
tttgggttgagtgtggttacttatgctcagcttcagagagggaacgctgtggtctccatg
gcgaaattcgatctcgagaggcttcttaagaatattgagaagtatagagtcactcagctt
tgggttgttcctcctgtgttccttgctctcgccaagcaaagtattgtgaagaagtatgat
ctttcttcgcttaagtacattggatcaggagctgctcctcttgggaaagattcgatggag
gagtgtgcaagaaacatccctaatgttgtgcttatgcagggttacgcaatgactgaaacg
tgtggaatagtctctatggaagaccctagacgcggtaaaaggaactctggttcagctggg
atgcttgcttcaggtattgaagctcaggtggtcagtgtagaatctggaaagcctcaacct
ccaaatcaacaaggcgagatatgggttcgaggccctaacatgatgaaaggttatctcaac
aaccctgaggctaataaagaaactatagatgagaatggttgggtacataccggagatctt
ggatacattaacgaggatggtaacctcttcattgttgaacgactcaaagaacttatcaaa
tgcaacggcttccaggttgcaccagctgagctagaaggtcttcttgtatcacatcctgaa
ttactagacgctatcgttatcccgttccctgatgtgtatgctggtgaagttcctattgca
tttgttgtacggtcaccgaataccacgataacagaggaagatattcaaaagttcatagcc
gaacaggttgctccttataaaagactacgaagagtgagcttcgttagcagtgttccaaaa
tctctagctggtaaactcttgagaagagaacttcgggagcaagtaagatccaagatgtga
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