Brassica napus (rape): 106351347
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Entry
106351347 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106351347
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106351347
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106351347
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106351347
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
106351347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106351347
NCBI-ProteinID:
XP_013646640
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All DBs
Position
C1:1747351..1749376
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AA seq
239 aa
AA seq
DB search
MADSRRHEERDSRSPSPRKERSLSRSRSRSRSVPRARSRSRSRSLPRPISPSRNRGRRSE
VENPGTTLYVTGLSTRVTDKDLEAHFSKEGKVASCFLVMEPRTRESRGFAFVTMDSVKDA
DRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDNEKKDRDGRSSRGRHYD
RDDYGHRRSPRRDYSPRGGGRRSPPRREYSPRGGGRSSRRDRSYSPYGRSPERRSERRY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcgccgtcacgaagaaagagattcacggtctccttcacctcgaaaagaa
cggtccctttccaggtccaggtccaggtctagatccgtgccgagggctaggtcaaggtca
aggtcaagatctttgccaaggcctatatctccatcaagaaaccgtggaaggaggtctgaa
gttgaaaaccctggtaccactctctatgtgactggcctatccacaagagtcactgacaag
gatctcgaagctcatttctccaaggaaggcaaggtagcgtcttgctttcttgtaatggag
ccgcgcacccgtgagtctcgtggttttgcctttgttacgatggatagcgttaaagacgct
gaccgttgcatcaagtatctcaaccaatctgtacttgaaggccgttacatcactgttgaa
aggtcccgaagaaagcgccccagaactcccacccctggccactatcttggcttgaaaagc
tccagagacaatgaaaaaaaagaccgagatggccgtagcagtcgagggaggcactatgat
cgtgatgattacggacaccgtaggtcaccaagacgcgactactcacctcgtggtggtgga
aggaggtcaccaccaagacgtgagtattcgcctcgtggtggtggaagaagttctagaaga
gatcggtcttactctccttatggaagaagcccagagagaaggtccgagagaaggtattaa
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