Brassica napus (rape): 106357243
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Entry
106357243 CDS
T04128
Name
(RefSeq) cyclin-dependent kinase D-1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106357243
09124 Replication and repair
03420 Nucleotide excision repair
106357243
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106357243
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106357243
03019 Messenger RNA biogenesis [BR:
bna03019
]
106357243
03400 DNA repair and recombination proteins [BR:
bna03400
]
106357243
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
106357243
2.7.11.23 [RNA-polymerase]-subunit kinase
106357243
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: CMGC group
CDK family
106357243
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106357243
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
106357243
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106357243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
HYPK_UBA
APH
Motif
Other DBs
NCBI-GeneID:
106357243
NCBI-ProteinID:
XP_013652374
UniProt:
A0A078J924
LinkDB
All DBs
Position
A7:25679339..25683899
Genome browser
AA seq
397 aa
AA seq
DB search
MVDQYSEMDKPKKVADRYLRQEVLGQGTYGVVFKATDTKNGQTVAIKKIRLGKEKEGVNI
TALREIKLLKELKHPHIIELVDAFPHKENLHLVFEFMETDLEAVIRDPNLFLSPADVKSY
LQMTLKGLEYCHDKCVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFTRW
YRAPELLFGSKHYGSAVDVWAVGCIFAELLLRKPFLQGKSDIDQLSKIFAAFGTPKEDQW
PDMLSLPDYVEYQFVPGASLLSSFPMVSDDGLDLLSKMFTYDPKSRISIHQALQHRYFTS
APSPTDPLKLPRPVHKKEAKSSESKLKTITVLSPAHKLRRVMPDRGKSTDVMKQASHDGQ
APMSLDFTILAERPPNRLTITSADRSNLKRKLDLEFT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcaatacagtgagatggataagccaaagaaagttgctgataggtatctgagg
caagaagttcttggccaaggcacttatggagtcgtcttcaaagctactgatactaagaac
ggacaaactgtagcgatcaagaagataagacttggtaaagagaaagaaggtgtgaacata
acagctctaagagaaatcaaattactcaaagagcttaaacatcctcatattatagagttg
gttgatgcctttcctcacaaagagaacttgcaccttgtgtttgagttcatggagactgac
ctagaagcagttatccgagatcctaatctctttctctccccagctgacgtcaaatcttac
ctccaaatgacactgaaaggtcttgagtattgccatgacaaatgtgttttgcacagagat
atgaagccgaacaacttgttgataggacccaatggacaactaaaactcgcagactttggt
ttagcacgtatatttggtagtccaggtcgtaagtttacacaccaggtctttactagatgg
tatagagcacctgagcttctgtttggttccaaacactatggttctgctgttgatgtttgg
gctgttggctgtatcttcgctgaacttctattacgcaaaccttttcttcaggggaaaagt
gatattgatcagttaagtaaaatctttgctgcctttgggactcctaaagaagatcagtgg
ccagatatgttgtctcttcctgattatgtagagtatcagtttgtccctggggcgtctcta
ctttcttcattcccaatggttagtgatgatggtctagatttgttgtcaaagatgttcact
tatgatcccaagtctagaatatcgattcaccaggctttgcaacacaggtacttcacatct
gcaccttctcctactgaccctttaaagctaccaagaccagttcacaagaaggaagctaaa
tcatctgagagtaaactcaaaactattacggtgttgtcaccagcacataagcttagaaga
gtgatgcctgaccgaggaaagagtacggatgtcatgaaacaagctagccatgatggacaa
gcacctatgtctttagatttcactatactagccgagcggccaccaaatcgactaaccatt
accagtgcggatagatctaatctgaagaggaaactcgatcttgagttcacgtag
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