Brassica napus (rape): 106358228
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Entry
106358228 CDS
T04128
Name
(RefSeq) OPC-6:CoA ligase-like
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
bna
Brassica napus (rape)
Pathway
bna00592
alpha-Linolenic acid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
106358228
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106358228
NCBI-ProteinID:
XP_013653430
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Position
A7:13243652..13246754
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AA seq
542 aa
AA seq
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MASLIDSRSGFCKSNSTFYSKRNPLPLPANPSLDVTTFISSQPHRGTTAFIDAATGHRLS
FSELWTAVERVADCLHHDIGLKRGHVVLILSPNSIYIPVVSLAVMSLGAVVTTANTLNTA
AEISRQLADSNPTLAFTTADLAPKLAGSGISVVLERVGSTRGVDVVGAVSEMMKKERRGQ
RVRDRVNEEDTAMMLYSSGTTGPSKGVITSHRNLTASVARFVSEKRIGGEVFLCTVPMFH
TYGLLCFTMFTVAVGSTVVILRRFDLHGMMAAVEKYSATILALTPPVVVAMTNEADVIRA
KYDLSSLRTVRCGGAPLSKEVTEGFMEKYPTVDILAGYALTESNGAGASIDTVEESRRYG
SVGLLAPGVEARIVDPDTGRVMGVNQTGELWLRGPSISKGYFKNEEATNETINLEGWLKT
GDICYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLVTHPDILDAAVIPFPDKEAGQY
PMAYVTRKIESNLSEKQIIDFVSKQVAPYKKIRKVAFINSIPKNPSGKTLRKDLIKLATS
KI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcattgattccagaagcggtttctgcaaatcaaactccacattctacagc
aaacgcaacccattgccactcccggcgaacccttcccttgacgtcaccactttcatctcc
tctcagcctcaccgcggcaccaccgccttcatcgacgcagccactggccaccggttaagc
ttctccgaactctggacagccgtcgaacgcgtcgctgactgtctccaccatgacatcgga
ttaaagagaggccacgtcgtcctcatcctctctcccaactctatctacattcccgtcgtc
tccctcgccgtcatgtctctcggcgccgtcgtcaccaccgcgaacactctcaacaccgcc
gccgagatatccagacagctcgccgacagcaacccaactctcgccttcacaaccgccgac
ctggctcccaaactcgccggttccggtatctccgtcgttctcgagcgcgtggggtccact
cgcggagtcgacgtcgtcggggctgtgagcgagatgatgaagaaggaacggagggggcaa
agagtcagagaccgagtcaacgaggaggacacggcgatgatgctttactcgtcgggcaca
acggggccgagcaaaggagtgatcacgtctcaccggaacttaacagcctccgtggcgagg
tttgtctcggagaaacggataggaggcgaggtgttcctctgcaccgttcccatgttccac
acctatgggctactctgcttcactatgttcaccgtagcagtgggttccacggtggtgatt
ctccggagattcgacctccacggtatgatggccgccgttgagaagtacagtgccaccatt
cttgctttgacgccgccggttgtggtagctatgactaacgaggcggatgtgatcagggcc
aagtatgatctgagctcgctgaggacggtgagatgcggtggggcgccgttgagtaaggag
gtgacggaggggttcatggagaaatatccgacggttgatattttagctggatacgctttg
acggaatccaacggtgcaggagcttcgattgatacggtggaggagagccggagatacggc
tcggtggggttgttggcgcccggtgtggaagcgaggatcgtggatccggatacgggtcgg
gtcatgggtgtgaaccaaacgggcgagctctggctcagagggccttctatttccaaaggt
tattttaaaaacgaggaagctacaaatgaaaccattaatttggaaggatggctaaaaact
ggagatatctgttatatcgatgaagatgggtttctttttgtcgtggatcggttgaaagaa
ctaatcaaatacaaaggctatcaggtacctccagccgaactagaggctctcttggttact
catccagacattctagatgccgctgttattccgtttcctgataaagaagcgggacaatac
ccgatggcctacgtgacacgaaagattgagagcaacctatcagagaagcaaattattgac
ttcgtgtctaaacaggtggcaccgtataagaagataagaaaagtcgcatttataaactcc
ataccaaagaatccatccggcaagacacttcgtaaagatctaatcaaactcgccacttct
aaaatttga
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