Brassica napus (rape): 106358446
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Entry
106358446 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106358446
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
106358446
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
106358446
NCBI-ProteinID:
XP_048592806
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Position
A7:14608726..14612443
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AA seq
705 aa
AA seq
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MADETLPPADPVDITLPEKTTSLSPPPPPPQHEQELQEQQQEEKQPRERDSRERRDEIDL
ERPPNRRDRSPPPPPRRDYKRRPSGSPPPPYRGDRRHSPPMRRSPPPPKRYRRDDNGYDG
RRGGGYGPPDRRFGYDYDREMGGRPGGYGDDRPHGRFMGRHQDWEGGRGRYGDASYSGNT
QRDGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRVYFNTHKEEEWLKDKYHPT
NLLTVIEKRNELAQKVAKDFILSLQSGNLDLGPAATALNKAGRSSEPNSEDEADGDGKRR
PVKRESAGTDVLAAPKAPSFTSDPKRILTDIEQTQALVRKLDAEKGIKENVLSGSETEKS
GRDNVHSGSTGPVIIIRGLTSLXELLDTLVTYLWRVHGVDYYGKLETNEAKGMRHVRAEG
KGSDAKGDESENKFDSHWQERLKGPDPLEVMAAKEKLEAAAIEALDPHVRKIRDEKYGWK
YGCGAKGCTKLFHAAEFVHKHLKLKHAELVVDQTAKVREELYFXNYMNDPNAPGGQPATQ
QPGPRDRPMMRRKPGMENRLRDDRGGRRERAYGNDRNDRSEDQRRGDGNGPVDPNPEEGG
GFEAFGGQGGFQVPPYSADMNAPPMLMPVPGAGPLGPFVPAPPEVAMQMFRDPSGPNPSF
EGGGRGGPAPFLLSPAFRQDPRRLRSYQDLDAPEEEVTVIDYRSL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagactcttcctccggctgatcccgtcgacatcaccctccccgagaagacc
acctctctctcaccgcctcctccgccgccgcagcatgaacaagagctgcaggaacagcag
caagaggagaagcagcctcgcgagagagattcccgcgagcgccgcgacgagatagatcta
gagcgtccgccgaatcgccgcgaccgttcgccccctcctccgccccgcagggattacaag
aggcggcctagcgggagccctcctccgccgtacagaggagataggcggcactctcctcct
atgcgccgctcgcctcctcctcccaagcgttataggagggacgataacggctacgatggt
cgccgtggtggcggctatggcccacctgacagaagatttggatatgactatgaccgtgaa
atgggagggaggcctggtggttatggtgatgatagacctcatggccgctttatgggacgc
catcaagactgggagggaggtcgtggacgctatggtgatgcatcttatagtggaaatact
caaagggacggattgatgtcatacaaacagtttatccaggagttggaagatgatatactg
ccatcagaagctgaaagaaggtatcaagaatacaagtcggagtatatcacaacccagaaa
cgtgtctattttaacactcacaaagaggaagaatggttgaaagataagtatcatccaacg
aacttactaactgtaatagaaaagaggaatgaacttgcacagaaggtagcaaaggatttc
atacttagtttacagagcgggaatctagatttaggtcctgcagcgacagcattgaataaa
gctggccgcagcagtgagccaaattctgaggatgaagctgatggtgatggtaaaagaaga
cctgttaagcgggaaagtgcagggactgatgtattggccgcaccgaaagcaccaagcttc
acttctgatccaaagagaatcctaactgacattgaacaaacacaagcccttgtacgtaag
ctcgacgcggagaaaggaattaaggagaacgttttatcaggttccgaaactgaaaagtcg
ggtagagataatgtgcacagtggttcgactggtccagttataattataagaggtttgacg
tcccttngtgaattacttgacacccttgtcacatatctctggcgtgttcatggtgtggac
tattacggaaagcttgaaacaaatgaagccaagggtatgcggcatgtgagagcggaagga
aaaggttctgatgcaaaaggagatgagagcgaaaataaatttgactctcattggcaagag
aggttgaaagggccagatcccttggaagtgatggctgccaaagagaagctagaggctgct
gctattgaagctttagatccacatgtccgaaagattagggatgagaagtatggttggaaa
tatggttgtggagctaaaggctgcacgaaactgtttcatgctgctgaatttgtgcacaag
catctcaagctcaaacatgctgagcttgtagtggaccagactgccaaagtgcgggaagaa
ctttatttttagaactatatgaatgatcctaatgctccaggaggacaaccagccacgcag
caacctggcccgagagatagacctatgatgagacgtaagccaggcatggagaacagattg
agggatgatcgaggtggacgcagagagcgtgcttatggaaatgacagaaacgatagatca
gaggatcaacggaggggtgatggaaacggtcctgttgatccaaatccggaggaaggtggt
ggcttcgaagcatttggtgggcaaggcggttttcaggttcctccctactcggctgatatg
aatgcaccaccaatgctgatgcctgttcctggtgccgggccactaggaccatttgtacca
gcaccacctgaggttgcgatgcagatgttcagggacccgagtggacccaacccttctttt
gaaggtgggggcagaggtggaccagccccttttctgttgtctccggcctttagacaggat
cctagacgtctacgaagctaccaagacctagatgcgccagaggaagaggtgaccgttatt
gattacaggagcttgtag
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