Brassica napus (rape): 106360747
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Entry
106360747 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106360747
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
zf-RVT
DUF4283
Exo_endo_phos
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
106360747
NCBI-ProteinID:
XP_048624842
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All DBs
Position
A1:complement(10820993..10826412)
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AA seq
1712 aa
AA seq
DB search
MQTRWALPGRASAVQPASSTSGEALLPPPDPPDPQSPLSPHLFPPLDSTPPLTRSQTRRS
HLTTTHVDTVMTQAQHPTTASAISQATTQFGSLAEIESILTVPATGNPKTLSSSSTTNPS
PSLEKLNLPYSEPNPTNFKILQPNHNSPLLSNSASTSLTPSDPALPSPPVRSTIPNSQPH
TAPPQLNPPPIFQPQPQTHNAAPTLAETLRVRGDKSLQRLAPVTIFETGRPRVLIPNSVF
HKGAELHKDFIICRRLEMHNNPLQRSVLVRIPSDFLRQKILEKNIWYVGDSMFHTAQWSS
VHSSTTPLLSSIQIWAHLTGVPLDLRYKQGLSLVAGLIGEPKETDDFTLNLVSLTLSHVK
VEVDLTKPLPIVVEFQRQSGEVVEVQVDYPWLPPTCAHCHELGHIMKNCLLYIPPKDPPP
IAKVPVDKSKQKISDSAIKTPTKSVKTKQYVVKKPFPPITVEPLLSTHTVSLPTSPSAFN
TPSFVPMPNQKIFPSTAHISSDKPQKPSLKRTRSSPTISPTAPPKIIYQSSKPSPDLSFP
VIVYWGTLFFYIMSVKLFFWNLRGLNDPVKHRTFSDWLYSHRPIFGALLETHIKELSLSR
LMSTLCRDWHYLSNHSSDEDGRIVLIWKDPAKVRVITQSRQMITCEIELPNCTPIIYSAI
YASNTIEERTDLWVELLNLHSAHDLDSRPWMVGGDFNQILHPYEHSSFCHSTHSSQMFQF
RDSLLQMGVFDLRFYGPVHTWTNKCDGSPIAKKLDRCLINSECLTSYPNATATFLPPAPS
DHSPCLIDLAFQLPKAGTQPFRFLNYLTKHPSFLEVVTDAWLLAGSVSANFASLCWKLKS
IKRSLKILNKENFSNIQQRVNEAYRLLQLVQVQALSDPTPENFAEEHDLNLKWQFLWQIE
ECFFQQKSRITWLREGDLNTTFFHRVCQMRASFNAIRSFLLLSGVLITDPLEMSAHAIAH
FKGVLGPDSLPSLWYTPADWFRSLTHVRCSQQQINSILLMPTNEEITKLMFSLNPNKAPG
PDGLTSGFFKASWSLLGAECVNSIQDFFDSGFLPKTTNSTILSLVPKFTGASTISDYRPI
SCLNTLYKVISRLLVRRLKPILSQLILPNQTAFVEGRLLVENTVLASELVNGYHRNKGTK
KITIKVDIEKAFDTLSWEFLFTALDSIDLPAPFIRLLKACICTTTFMVGYNGTVNGFFKG
KRGLRQGDPLSPYLFVIAMNYLSMMLDKEARAGYISYHHQCHKTKLTHLSFADDLLIFID
GSLESVQRVLQLLHEFEKRSGLAVSLQKSSFFASGLTEQDIATIQVSTGMPCGSLPMRYL
GVPLCTKKLNLQNCEPLLQQIKKRLSSWSAQALSFAGRLLLIKTVISGVTTFWCSSFILP
KSCINKINSLCGIFLWKGKSEGHHTARVSWETVTLTKDQGGLGVKDLHTWNLACILKLIW
MLFFRPNSVWVCWFKEVILKGDVSNYWTIGTSTNHSWLVNKMIKARAIVYPLLKRPTVAS
LYTEGRWNIPAARTDNQLALQVHLTTVELLDEEDYFEWEIDGRVRHSYRTGETYTYLKGP
QPLVPWAKIVWFSYGIPRHCFLTWLVLLDRCPTRDRLTRWGLNVDPLCLFCNTDHESRNH
LFFECRYSVTVWNQIAYRCDLQAHASWDDNLNQLLALRGNRDSLRLRLLATQATIYWLWN
ERNTRLHHQIFRPPGALISLIDKQIRNRLQSF
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcgttgggcccttcctggccgtgcttccgccgtgcaaccagcgtcttcaacc
tccggagaagctctcctaccaccacctgacccccctgaccctcagtcccctctttctccc
catcttttcccaccattagactccactcctcctcttacccgttctcaaactcgtagatcc
cacctcactaccacccatgttgatactgttatgactcaagctcaacacccaactacagct
tcagccatctctcaagccactactcagtttggttcgctagctgagattgaatctatactc
actgttcctgctacaggaaaccctaaaactctttcctcatcctcaaccactaacccttcc
ccctctctggaaaagcttaacttaccttattcagaaccaaatcccaccaatttcaaaatc
cttcaaccaaaccacaactctcccctgctctctaacagtgcctctacctccctaactcct
tctgatcccgctcttccttcccctcctgtaagatccaccattcccaactctcagccacac
actgcccccccacaactaaatccacctcctattttccaaccccaaccccaaacccataat
gctgctcctactctagcggaaactcttcgtgtgagaggagacaagtctctccagagactc
gctccagtaactatctttgaaactggtcgacctcgtgtgctaatcccgaactctgtcttt
cacaaaggcgcagagcttcataaagatttcattatctgtagaaggcttgagatgcataac
aaccctctacaacgctcagttctggttaggatccctagtgacttccttcgacagaagatc
ttggaaaaaaatatatggtatgtgggggattcgatgtttcataccgctcaatggtcttct
gtgcattcctccacaacacctcttcttagctctatccagatttgggctcacctcactgga
gttcctctcgacctacgttataaacaaggccttagcctagttgcggggttgattggagag
cctaaagaaacggatgactttactctaaacctagtgagtcttaccttatctcatgtcaag
gtggaagtagatctcaccaagcctcttccgattgtagtggagtttcaaaggcagagtgga
gaagttgttgaagtgcaagtggactatccatggctgcctcccacatgcgctcattgtcat
gagttgggtcatatcatgaaaaattgtttgctctacataccgccaaaggatccacctcct
atagcaaaagttcctgtggataagtcaaagcaaaagatctcagactcggcgataaaaact
ccaacaaaatctgtaaaaaccaaacagtatgttgtcaagaaaccattccctcccatcacc
gttgaacccttactttccacccacactgtttcacttcccactagcccctctgctttcaat
actccctcttttgtccctatgccaaatcagaagattttcccttccaccgctcacatttct
tcggacaaacctcaaaaaccatcattaaaaagaacccgttcctccccaaccatttcccct
actgcacctcccaaaatcatctatcagtcttctaaaccgtcccctgacctttcattcccc
gtgattgtctactggggaaccctctttttctacataatgagtgtaaaactctttttttgg
aacctccgtggtctaaatgacccggtaaaacatcggacattttcggattggctttatagt
cacagacccatttttggtgctctattggaaacacatattaaggaactatctctatcccgt
ttgatgtctaccctatgtcgagactggcactatctatctaaccattcatctgatgaagat
gggagaatcgtgcttatttggaaggatccagcaaaagttcgagtgataacacagtcaagg
caaatgattacttgtgagattgagctgcctaattgtactcctatcatctactctgccatc
tacgcttcaaataccattgaagagagaactgacctttgggtggagcttttgaacttgcat
tctgctcatgatctggattcaaggccttggatggtaggaggggactttaaccagattctt
cacccttacgagcattcatccttctgtcacagtacacattcttcgcaaatgttccaattc
cgtgatagtttactacagatgggagtgtttgatcttcgattctatggccctgttcacaca
tggacaaacaaatgtgacggctccccaattgcaaagaaactagacagatgtttgatcaac
agtgagtgtcttaccagttatcctaatgccactgcaactttcctccctcctgccccttca
gatcactccccgtgccttattgacctagccttccaactccctaaagcaggaactcaaccc
ttccgcttcctaaactaccttaccaaacacccgagcttcctggaggttgttactgatgca
tggttgctcgccggaagtgtgtctgccaactttgcgtctctgtgttggaagctgaaaagc
attaaaaggagtcttaaaattcttaataaagaaaatttctcaaatatccaacagagagtt
aatgaagcttaccgtttgttacaacttgtgcaggtacaagccttgtcagatccaactcct
gaaaattttgctgaagaacatgatcttaatctgaaatggcaatttctctggcaaattgaa
gaatgcttctttcagcaaaagtctagaataacatggcttcgtgaaggagatctgaatact
accttcttccaccgtgtctgccaaatgagagctagcttcaatgcaatccgctcgttcctc
cttttgtcaggtgttctcatcacagacccactggagatgagtgctcacgctatagctcac
tttaaaggtgttcttggacctgattccctcccatcgctctggtacactccggctgattgg
tttcgtagcctcacgcatgtcagatgcagccagcagcagataaactcaatcctcctgatg
cctacaaatgaagagatcactaagctaatgttttcccttaacccaaataaagctccgggg
cctgatggactcacctctggattcttcaaagcttcttggtctcttctaggtgcggaatgt
gtcaactcgattcaagattttttcgactcagggttcctgccaaaaaccacaaattcaacg
atcttgtctttggttcctaagttcactggagcatctacaatatcagactaccgtcctatc
tcctgtctgaataccctctataaagtcatttcacggttgctggtgagacgtctaaagcct
attcttagtcagctaatcttgcccaatcaaacagcgtttgttgagggtagactcctagtg
gaaaatactgtattggctagcgaactagtgaatggctaccacaggaacaaaggaactaag
aagattaccattaaggtcgatatagaaaaagctttcgacactctctcttgggagtttctg
ttcacagcgttggatagtatagatctccctgctcctttcatccgattgctgaaagcttgc
atctgcacgacaacatttatggtgggttacaatggcacggtgaatggtttcttcaaagga
aaaaggggactaaggcaaggagacccactctctccctacctgtttgtcattgctatgaac
tacttgtcaatgatgttggataaagaagcgagggcaggatatatatcttaccatcatcag
tgccataaaacgaagctaactcatctctcctttgccgacgatctactgatcttcattgat
gggtcacttgagtccgttcagagggtgctccagctactgcacgaatttgaaaagagatca
ggtctggctgtgagtttgcaaaaatctagtttttttgcttcgggacttacagagcaagat
attgcaactatccaagtttcgacggggatgccgtgtggttcattaccaatgcgatatctc
ggagtccctctgtgtacgaaaaagctcaacttgcagaactgcgagcctctacttcagcag
attaagaagcgtctatcctcctggtcagctcaggctctgtcatttgcggggcggttactc
ttgataaaaacggtgatctcgggtgttacgaccttttggtgttccagcttcatcctacca
aagtcatgcatcaataaaatcaattcactgtgtggcatattcctttggaaaggcaagagc
gaaggtcaccatactgctagagtaagttgggagacagtaacacttaccaaagatcaggga
ggactgggagttaaagaccttcatacttggaaccttgcgtgcatactgaagcttatctgg
atgctcttctttcgcccgaattctgtgtgggtctgctggtttaaggaggtaatcctaaaa
ggcgacgtatcaaactactggacgataggaacaagcaccaaccattcttggctagtcaac
aagatgatcaaggctagagctattgtctacccgctgcttaaacgaccaacggtggcgtct
ctctatactgaaggccggtggaatatccctgcagcaagaactgacaatcaattagcgctt
caggtacaccttactaccgtagaattactagatgaggaggattatttcgaatgggagatt
gatggaagagttagacacagttacagaactggtgaaacatatacttacctcaagggtccg
cagccactagttccttgggctaagattgtctggttctcatacggaatcccccgacactgc
ttcctcacttggttagtcctactggatcgatgtcctacaagagacaggttaacaagatgg
ggtcttaatgtagatccgttatgcttattttgcaacactgatcatgagagtagaaatcac
cttttctttgagtgtcgttacagtgtcacggtctggaatcagatagcatatcgatgcgat
ttgcaagctcatgcctcatgggacgacaatctcaatcaactcctggctctccgagggaat
cgcgattctcttcgtcttcgactactagcaactcaagccacgatttactggctctggaat
gagcgtaacacacgtctccaccaccaaatcttcagacctccgggtgcgttaatatcactc
atagacaagcaaatccgtaaccgtctccaaagcttctga
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integrated database retrieval system
