Brassica napus (rape): 106361747
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Entry
106361747 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106361747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106361747
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106361747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
106361747
NCBI-ProteinID:
XP_013657011
UniProt:
A0A078IZW8
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Position
C3:complement(55845335..55847667)
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AA seq
386 aa
AA seq
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MFGTPSSTPLFGSSSTSAFGTPSSTPAFGTPSSTPAFGTPSATPAFGTPSSTPAFGTPST
SSFASGGFGNSLFSTPFSSQQPQQQQQTSPFQQPASTGFGFQSPFNTAQQQTPFQNTQLT
TQMAPVAPIPFSLADRDIQAIVEAYKEDPTNPKYAFKHLLFSVTEQQYRVKPAAVSDIMW
AEAMSKLEGMDSSERERLWPQLVQGFKDLSQRLKLQDEVLVSDRERIKTTQSNVKMLQRH
LQAHTFPSIERLRQKEQNFQRRMLRVMRIVEGLEGKGFRLPLTKGEAELSEKLTGITRQV
KGPGAELSRRVQSLQTICRAQANSFSAGSSIYLPGSTKIDEQSLIDMQEVLQQETEAIGR
LGNVLKRDMRDMEIMVAEDTEMTEDT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccgtcgtccacgccgttgttcggttcctcctcaacctccgccttcggc
actccttcgtctacccctgcgttcggtacgccgtcgtccacgcccgccttcggaacgccc
tcagccacgccggccttcggcacgccttcatccacgccggcgttcgggacgccgtcgaca
tcttccttcgcctcgggcggatttggcaactcgctcttctccactccgttctcatctcag
cagccacagcaacaacagcagacgtcgccgttccagcagccggcgtctactggtttcggt
tttcagtcgccgttcaacacggcgcagcagcagacgcctttccaaaatacgcaattgact
actcagatggctcccgttgctcccattcctttctccctcgccgatcgtgatatccaggcc
atagttgaagcctataaagaagatccgacgaaccctaagtatgcgtttaagcatcttttg
ttcagtgtgactgaacagcagtatcgtgtcaagcctgcagctgtatcagatataatgtgg
gcagaggccatgagcaaacttgaaggcatggattcatcagaaagagagcgcctttggcct
cagcttgtgcaaggctttaaagatctttctcagcgccttaagcttcaagatgaagttctc
gtatcagatagggaaagaataaaaactactcagagcaacgtgaaaatgcttcaaagacat
ttgcaagcacatacctttccgtctattgaaaggttgagacagaaggagcagaattttcaa
agacgcatgttgagggtgatgaggatagtggagggcttagaggggaagggtttccggtta
cccttaacaaaaggagaggccgaactgtctgagaagctaactggaataacaagacaggtg
aaaggtcctggagcagagctttcaaggagggtgcaaagtctgcagacaatatgtcgcgct
caagcaaattccttctctgctggtagctccatttatctcccggggtcaactaaaatagac
gagcagagtctgattgatatgcaggaggtattgcaacaggagacagaagcaataggaagg
cttgggaacgtattgaagcgagacatgagggatatggaaatcatggtggctgaagataca
gagatgaccgaggacacatag
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