Brassica napus (rape): 106361889
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Entry
106361889 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106361889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106361889
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106361889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
106361889
NCBI-ProteinID:
XP_048593928
LinkDB
All DBs
Position
A8:18493754..18496069
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AA seq
399 aa
AA seq
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MFGTPSSSPAFGTPSSTPMFGSSSTSAFGTPSSTPAFGTPSSTPAFGTPSATPAFGTPSS
TPAFGTPSTSSFASGGFGNSLFSTPFSSQQPQQQQQQQQQNSPFQQPASSGFGFQSPFNT
AQQQTPFQTTQLTTQMAPVAPIPFSLADRDIQAIVEAYKEDPTNPKYAFKHLLFSVTEQQ
YRVKPAAVSDIMWAEAMSKLEGMDSSERERLWPQLVQGFKDLSQRLKLQDEVLVSDRERI
KTTQSNVKMLQRHLQAHTFPSIERLRQKEQNLQRRMLRVMRIVEGLEGKGFRLPLTKGEA
ELSEKLTGITRQVKGPGAELSRRVQSLQTICRAQANSFSAGSSIYLPGSTKIDEQSLIDM
QEVLQQETEAIGRLGNVLKRDMRDMEIMVAEDTEMTEDT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccgtcctcctcgccggcgttcggcactccgtcgtccacgccgatgttc
ggttcctcctcaacctccgccttcggcactccttcttccaccccggccttcggtacgccg
tcatccactcccgccttcggaacgccctcagcaacgcctgccttcggcacgccttcatcc
acgccggcgttcggaacgccgtcgacatcttccttcgcctctggaggatttggaaactcg
ctcttctccactccgttctcatctcagcagccacagcaacaacagcagcagcagcagcag
aactcgccgtttcagcaaccggcgtcttctggtttcggttttcagtcgccgttcaacacg
gcgcagcagcagacgcctttccaaactacgcaattgactactcagatggctcccgttgct
ccgattcctttctccctcgccgatcgagatattcaggccatcgttgaagcgtataaggaa
gatccgacgaatcctaagtatgcgtttaagcatcttttgttcagtgtgactgaacagcag
taccgtgtgaagcctgctgctgtatcagatataatgtgggcagaggctatgagcaaactt
gaaggcatggattcatcagaaagggagcgcctttggcctcagcttgtgcaaggctttaaa
gatctttctcagcgacttaagcttcaagatgaagttctcgtatcagatagggaaagaata
aaaacgactcagagcaacgttaaaatgcttcagagacatttgcaagcacacacctttcca
tctattgaaagattgagacagaaggagcagaatcttcaaagacgcatgttgagggtgatg
aggatagtagagggcttagaggggaagggtttccggttacccttaacaaaaggagaggcc
gaactgtctgagaagctaactggaataacaagacaggtgaaaggtcctggagcagagctt
tctaggagagtccaaagtctgcagacaatatgtcgcgcccaagcaaattcattttctgct
ggtagctccatttatctcccggggtcaactaaaatagacgagcagagcctgattgatatg
caggaggtattgcaacaggagacggaggcaataggaaggcttgggaacgtattgaagcga
gacatgagggatatggaaatcatggtggctgaagatacagagatgaccgaggacacatag
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