Brassica napus (rape): 106387988
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Entry
106387988 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Organism
bna
Brassica napus (rape)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_1
LRR_8
LRR_4
Med19
ABC1
APH
Pkinase_fungal
DUF2951
V_ATPase_I
PIP49_C
DUF3899
Connexin
DUF6548
Motif
Other DBs
NCBI-GeneID:
106387988
NCBI-ProteinID:
XP_013683401
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Position
C3:10074732..10076869
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AA seq
644 aa
AA seq
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MIRMAVPTGLFLRPLILAVLSLLLLLSPSVSSSTEWLDIDASDLKALQVIETELGVNSQR
SLSSGVNPCGRGGVFCERRLSSSATGEYVLRVTRLVYRSRTLSGTISPVIGKLSELKELI
LSNNKLVNGLPVDVLSCKKLEVLDVRNNKFSGQIPGNFSRLIRLRILDLSSNKFSGNLNF
LKNLRNLESLSVSNNLFSGKIPQGVDSFHNLRFFDFSENRFLEGPVPVMSKIKTKIQTSS
LHQTRHILAETQNSTKKANNNTTNTSKATSEHDKKKTKKKKNKKKKVLAWILGFLVGGIG
GTLSGFVFSVIFRLVLRAIRGPEKPSGPTLFSPMIKKAEDLAFLENEEALASLEIIGRGG
CGEVFKAELPNGNGKIIAVKKVTQPSKEAGELVDEESRILNRHMRQIRSEIATVGHIRHR
NLLPLLAHVAQPECHYLVYEYMKNGSLHDILTDVAAGNRELMWPARHKIAVGIAAGLEYL
HMDHKPAIIHRDLKPANILLDDDMEARISDFGLAKVMPDAVTHITASKLAGTVGYIASEY
HQTLKFTDKCDIYSFGVILGVLVIGKLPSDVFFQTTDELSLIKWMRNMVTSENPSLAIDP
KLMEQGFDEQMLLVLKIACYCTLDDPKQRPNSKDVRTMLSQIKH
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatggctgttcccacaggtctctttctccggcctctcatcctcgccgttctc
tccctccttcttcttctttctccttccgtctcttcctccaccgagtggctcgacatcgat
gcctcagatctcaaagctcttcaagtcatcgaaacagagctcggagtcaacagtcaacgc
tctttgtccagtggtgttaacccctgcggccgcggaggagttttctgcgagagaaggctc
tcctcctccgccaccggagaatacgtcctccgtgtcacgagactcgtctaccgatccagg
accttgtcggggaccatctcgccggttatcggaaagttatcagagctaaaggaactcatt
ttgtccaacaacaaattagtcaacggtcttcccgttgatgtcttgagctgcaagaaactc
gaagtacttgatgtaagaaacaacaagttctccggtcagattccggggaacttctcacgc
ttgatccgtcttcggattcttgatctttcttcgaacaagttctccgggaacttgaacttc
ttgaagaacttgcgcaacctggagagtctctcggtttcaaacaatctcttctcaggcaag
atcccacaaggagttgactctttccacaatctccggttctttgacttttctgaaaaccgg
tttttggaaggtccggttccggttatgagcaagatcaaaaccaagattcagacatcttct
ctacaccaaacgagacacattctcgctgaaactcaaaactccaccaagaaagccaacaac
aacaccaccaacacatcaaaagcaacttcagagcatgataaaaagaagacgaagaagaag
aagaacaagaagaagaaagtactggcatggatcttagggttcttagtcggaggcatagga
ggaacactctctggctttgtcttctctgttatattcagactggtccttcgagcaataaga
ggaccagagaagccatcaggtcctaccctattcagtccaatgatcaagaaagctgaagat
ttagccttcttggagaacgaagaagcgttagcctctctggagatcattggaagaggaggc
tgcggagaagtcttcaaagctgagctacctaatggcaacgggaagatcatcgctgtgaag
aaagtgacgcaaccgtctaaagaagccggcgaacttgtagatgaagagtccaggattctg
aacaggcacatgaggcaaatcagatcagagatcgccacggtgggacacatcaggcacagg
aatcttctcccgttgttagcacacgttgcgcaacccgagtgccactacctagtctacgag
tacatgaagaacggtagtttgcatgatatactgaccgatgtggcagctggaaacagagag
ttgatgtggccagcgaggcacaagattgctgtaggtatagctgcagggcttgagtacctt
cacatggatcacaaaccagcaatcattcaccgagacttgaagccagcgaatattcttctc
gacgatgacatggaggctaggatttcggatttcgggctggctaaggtaatgcctgatgca
gtcacccacatcaccgcgtcgaagcttgcaggtaccgtgggatacatagcgtcagagtat
catcaaactctcaagttcacggacaaatgtgatatctatagctttggagtgattcttggg
gttcttgtgattgggaagcttccttcggatgtgtttttccagactactgacgagttgagt
ctgataaagtggatgaggaacatggtgacatcggagaatccaagccttgctattgatccg
aagctgatggaacaagggttcgatgaacagatgcttctggttctgaaaatcgcttgttac
tgtactttggatgatccgaaacagaggccgaacagcaaagatgtcaggactatgctgtcc
cagatcaaacactag
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