Brassica napus (rape): 106388117
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Entry
106388117 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106388117
09122 Translation
03015 mRNA surveillance pathway
106388117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106388117
Spliceosome [BR:
bna03041
]
Complex A
Other components
Complex A specific factors
106388117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
106388117
NCBI-ProteinID:
XP_013683570
UniProt:
A0A816K292
LinkDB
All DBs
Position
C2:7205177..7207291
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AA seq
402 aa
AA seq
DB search
MSGMYNQDGGGGAPIPSYGGGGGYGGGDAGYGGRGSSGGGGYGGRGGYSGGGGRGNRGGG
GGYQGGDRGGRGGGGGGRDGDWRCPNPSCGNVNFARRVECNKCGAPAPSGTGDRGGGGYS
RGGGGRDSGRSYESSRYDGGSRSSGGGGSYGSYNQHRDRDNGSYGQGPTPPPLAPIPSYD
GSGSYPPPPSGYGMEAVPPPSSYAGGPPSYGGPTRGYGGRGGGYDGGSAPRGQEASDGGD
AAAEKVKQCDENCDETCDNARIYISNLPPDVTVDELKDLFGGIGQVGRIKQKRGYKDQWP
YNIKIYTDDKGKNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIGVTMAEKSAPKAPAFD
QRGGGRGGGGGGGGYGGGDRRRDNYGSGPDRNHHGGNRSRPY
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacaatcaagacggcggcggaggtgcgcctatcccgtcctacggagga
ggtggaggttatggcggcggtgatgctggatatggaggacgcggttcctccggcggaggt
ggatacggcggacgcggtggttacagcggcggaggcggaagaggcaatcgaggcggcggc
ggtggatatcaaggaggtgatcgcggtggtagaggaggtggtggtggcggcagagatggt
gattggcgttgccctaaccctagctgtgggaacgtgaactttgcaagaagagttgaatgt
aacaagtgtggtgcacctgctccatctggtactggtgaccggggaggtggtgggtatagc
cgaggtggaggtggtcgtgatagtggtaggagctatgagagtagtagatatgatggtggc
agtaggagcagtggtggtggtggctcttatggtagttacaatcaacatagagatagggat
aatggttcttatggtcagggtcctacacctcctcccttggcacctattccatcttatgat
ggttctgggagttaccctccaccaccttccgggtatggtatggaagcagttccccctcct
tcaagctatgctggtggacccccatcatatggtggtcccacaaggggttatggtggtaga
ggtggtggctacgatggtggtagcgctcctcgaggccaggaagctagtgatggaggagat
gcagccgctgaaaaagtcaagcagtgtgatgaaaattgtgatgagacttgtgataatgcc
agaatatacatctctaatttacccccggatgtgactgttgatgaactcaaggatctcttt
ggtggcattggccaagttggaagaatcaagcagaagcggggttacaaagatcagtggcct
tataacatcaagatttacactgatgacaagggaaaaaataaaggtgacgcctgcttagcg
tatgaagatcctagcgccgcacactctgcaggcggctttttcaacaattatgaaatgagg
gggaacaagattggtgtaacgatggcagagaagtctgcgcccaaagctcctgcttttgac
cagagaggcggtggtagaggaggaggaggaggaggaggtggctatggtgggggagacaga
agaagggataactatgggtcaggaccagacagaaaccaccatgggggaaacaggtctcgt
ccatattga
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