Brassica napus (rape): 106388505
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Entry
106388505 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor protein kinase HPCA1
Organism
bna
Brassica napus (rape)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_8
LRR_4
LRRNT_2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
106388505
NCBI-ProteinID:
XP_013684045
UniProt:
A0A816VUR6
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Position
A3:complement(12400801..12405520)
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AA seq
953 aa
AA seq
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MSSRIGAFMLLIFLFFQILSVSALTNGFDGSALQALKAEWTKPPSNWEGADPCGTSWVGI
TCSNNRVVSISLGNLNVEGKLSGDIAALSELQILDLSYNTGLTGPLPPNIGELKKLKNLI
LVGCSFTGQIPQSIGQLEQLIYLSLNLNQFSGTIPASIGRLSKLYWFDIADNQIEGTLPV
SNGTSSPGLDMLLETKHFHFGKNKLSGSIPENLFSSNMTLIHVLFDGNQFTGKIPDTLSL
VQTLTVLRLDRNKLTGNIPTSLNNLTSLQELYLANNEFTGTLPNLTSLTSLYTLDVSNNT
FEPSPIPSWISSLDSLATLRMEGIKLNGSIPNSFFSPAQLQTVILKRNQIDSTLDFGTRF
SNQLEFVDLQYNNIDVYKQPSSNTVIQVILADNPVCQEEGNKPNYCSEIPPNTSYSTIPP
TCTPCDQGREASPSCRCAHPVIGTLYFRSPSFSGLLNSTNFEILQKSIEDFFKKLSYPVD
SVAIRNIRENATDHQLLIDLLVFPLGRESFNESGMSLVNFAFSNQTYKPPHIFGPYVFRA
NPYNQFSDAGGSSSSNMGIIIGAAVGAVVLLLLLTLAGVYALRQRKRADRATDQNNPFAK
WNTSKSSIDAPQLMGAKAFTFEELKKCTENFSEANDVGGGGYGKVYRGILPSGQLIAIKR
AQQGSLQGGLEFKTEIELLSRVHHKNVVRLLGFCFDRSEQMLVYEYIPNGSLRDSLSGKS
GIRLDWTRRLKIALGSGKGLAYLHELADPPIIHRDIKSNNILLDENLTAKVADFGLSKIV
GDPEKTHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIERGKYVVR
EVKTKMNKSRSLYDLQELMDTTIIASSSNLKGFEKYVDLALRCVEEEGVNRPSMGEVVKE
IENIMQLAGLNPNVDSASSSRTYEEAIKGSGDPYGKDSFEYSGNFPASKLEPQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagaattggagcctttatgctcctgatctttcttttcttccaaattttgtct
gtctccgctctcacaaatggttttgacggttctgctttacaagccctgaaggctgaatgg
accaagcctcctagtaactgggaaggcgctgatccttgtggaaccagttgggttggaatt
acatgtagcaataaccgggtcgtttcaatatcactaggtaacctcaacgtggaaggaaag
ctttctggggatattgcagccttgtctgaattgcagatcttggatttgtcatacaacacc
ggattgactggaccacttccaccaaatattggtgaacttaagaagttgaagaacttgatc
cttgtgggatgtagtttcactggtcaaatccctcagtctattggacaattagaacaactt
atatatctctccctaaatttaaatcaattcagtggtacaattccggcttccattggacgg
ttatcgaaactatattggtttgatatagctgacaatcagattgaaggaacgcttccagtt
tctaatgggacttcttcacctggacttgatatgcttcttgaaactaagcatttccatttt
ggaaaaaacaagctttcgggctctatcccagaaaaccttttcagttcaaacatgactttg
atacatgtgctattcgatggaaaccaattcacgggcaaaatcccggacacactcagcctg
gttcaaacgttgacagtgttacgccttgataggaataaactaacgggcaatattcctaca
agtcttaataatctcacaagtcttcaagaactgtacttggcgaacaacgaatttactggc
actcttccaaatctaaccagcttgaccagtctctacacattagatgtgagcaataacact
tttgaaccctcacctattccatcatggatctcttcattagactctctggcaacattaagg
atggaaggaatcaaactcaatggttcgataccaaactcatttttcagccctgctcagttg
cagactgttatcctaaagagaaatcagatagattcaacgttagacttcggtaccagattt
agcaaccagttggagtttgttgatttacaatacaacaacatagatgtctataaacaacca
tcttctaacacagtcatccaagtaatattggcagataatccagtgtgccaggaagagggt
aacaagccaaattactgctcagaaatcccacccaatacctcatattctacaatcccacca
acatgcactccgtgtgatcagggcagggaagcaagtccctcgtgccgctgcgcacatcca
gtcataggaacactctacttcagatctccttccttctcagggttgctcaactccaccaac
ttcgaaattctccagaagtctatagaagatttctttaagaaattgagttatcctgtggac
tctgtagccatcagaaacataagagagaacgctaccgatcatcagcttctaatagatctc
ttagtctttccattgggccgagagagttttaatgagagtggaatgtcacttgttaatttt
gcctttagcaatcagacttataaacctcctcatatatttggcccttacgtattcagagcc
aatccttacaatcaattctctgatgcaggaggttccagctcatcaaacatgggcattata
atcggagcagcagttggcgctgtggttcttctgttgttgttaactttagctggggtttac
gctctcaggcaaagaaagagagcagacagagcaactgatcagaacaatccttttgccaag
tggaatacaagtaagagcagtatcgatgctccgcagctaatgggagcaaaagcttttact
tttgaagagttgaagaaatgtacagaaaacttctcagaggcaaatgatgttgggggtgga
ggttatggcaaggtttacagagggattcttccctctggacaactcatagccatcaaaagg
gctcaacaaggatcattgcaaggaggcttggagttcaaaactgagattgaacttctttcc
agagtccaccataagaatgttgtcagactcttgggcttctgtttcgatagaagtgaacaa
atgctggtgtacgagtacattccaaatggatctcttagagacagtctatcaggtaagagt
gggatcaggcttgattggacaagaaggcttaaaatagcacttggttcagggaagggtcta
gcttatcttcatgagcttgctgatcctccaattatacacagagacatcaaatcaaacaat
atattacttgatgaaaatcttactgctaaggttgctgatttcggcctttccaaaattgtg
ggagaccctgagaaaacacatgtgacaacacaggtgaaaggaactatgggatacttggat
cctgagtattacatgacaaatcagttgaccgagaagagtgacgtgtatgggtttggtgtg
gtgatgcttgagctgttaaccggtaaaagtccaatagagaggggtaaatacgtggtgaga
gaggtgaagacaaagatgaataagtccagaagtttgtatgacctccaagaactgatggac
actacaatcatcgcaagcagcagcaaccttaaagggtttgagaagtatgtagatttggct
ctgagatgcgtggaggaggaaggagtgaatagaccatcgatgggtgaggttgtgaaagag
attgagaacataatgcagcttgcgggtttaaacccgaacgttgattcagcatcttcttcg
agaacgtacgaggaagctatcaaaggatccggtgatccgtatggaaaggattcgtttgag
tacagtgggaatttcccagcttcaaagctcgaaccccaatga
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