Brassica napus (rape): 106388535
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Entry
106388535 CDS
T04128
Name
(RefSeq) FACT complex subunit SPT16
KO
K25639
FACT complex subunit SPT16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106388535
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
106388535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT16
FACT-Spt16_Nlob
Peptidase_M24
Rttp106-like_middle
SPT16_C
CBD_PlyG
DUF3956
Motif
Other DBs
NCBI-GeneID:
106388535
NCBI-ProteinID:
XP_013684081
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Position
C3:complement(19658594..19663045)
Genome browser
AA seq
1085 aa
AA seq
DB search
MGDSRNGNARAPAGLPPRAPPRAANTYEIDVKNFISRTRALYAHWNQHSEDLWGSADALS
VATPPASDDLRYLKSSALNIWLLGYEFPDTIMVFTPKKIHFLCSKSKATLLEVVKKPALD
ELRIDVVMHVKAKGDDGTGQMDAIFRAIRDLPVGDGKESQVVGHIAREAPEGKFLETWTE
RLKNAMFQFVDITAGLSDLFAVKDGTEIINVKKAAYLAYSVMKNVVVPKLENIIDEEKDV
THSSLMDVTEKAILEPTKANVKLKAENVDICYPPIFQSGGKFDLKPSAASDDELLTYDPA
SIIICAVGARYNSYCSNVARTYLIDATPLQSKAYEVLLKAHEAAINALRPGTKLNTIYQA
ALSVVEKEAPELVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRSEMAFNVSLGFQNLEC
EEESRSKNKKFSLLLADTVIVKDQNPEILTTKCSKAVKDVAYSFKEEEEEKPRKKARTAG
PENYMTKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGSGDRRSTAKTST
DMVAYKNVNDVPQPRDLMIQVDQKNEALLLPIYGSLVPFHVSAIRTVSNQHESSQNNYIR
IIFNVPGTPFNPPDSNTLKNQGAIYLKEVSFRSKDSKHSSEVVQAIKTLRRQVNARESER
IERATLVTQEKLQLAGNKFKPLRLSDLWIRPQFSGRKRIPGTLEAHANGFRYSTTRPNER
VDVLFGNIKHAFFQPAEREMITVLHFHLHNHIMVANKKTKDVQFYVEVMDVVQSLGGGRR
SAYDPDEIDEEQRERARKNKINMDFNHFASRVNDMWQQPQFASLDLEFDQPLRELGFYGV
PHKTNAFIIPTSSCLVEITEMPFFVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKDVL
RVDSIPTTSLEGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFVEEGGWEFLNLDG
SDSESGGSEESDKEYEASDVEVESESEDEDSDSASLVESEDDEEEDSEEESEEEKGKTWD
ELEREATNADREHGAESDSEEDRKRRKMRAFGKSRPGTSGGGGGRSSGGGGSSMRNMPPS
KRKHR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggagactctcgaaacggtaacgcacgagctcctgctggcctgcctccaagagcgcct
ccaagagctgcgaacacctacgaaattgatgtcaagaacttcatctcacgcacaagagcc
ttgtatgcacactggaatcagcacagtgaagacctttggggatctgctgacgctctttct
gtagctacccctcctgcttccgatgatctgcgctacctgaaatcgtcggctttgaacatt
tggcttcttgggtatgagtttcctgatacaatcatggttttcacgccgaagaagatccat
ttcttgtgcagcaagagcaaggcaactctgcttgaagttgtgaaaaagcctgcacttgat
gagttgaggattgatgttgttatgcatgtgaaggctaaaggtgatgatggaacagggcag
atggatgccatttttcgtgccatccgtgatctacctgttggtgatggaaaggagtctcaa
gttgtgggacacattgctcgtgaggctcctgaaggtaagtttctggagacgtggactgag
aggctaaagaatgcaatgtttcagtttgtggatatcactgcggggttgtctgatctgttt
gctgttaaagacggaactgagatcattaatgtgaagaaagctgcgtatctagcctacagc
gtgatgaagaatgttgttgttcctaaacttgagaatattatcgatgaggagaaagatgtc
acccactcttcgttgatggatgtcaccgagaaagcaatacttgagccaacgaaagccaat
gtgaagctgaaggcagagaatgttgacatatgctaccctcccatatttcagagtggaggc
aagtttgatctgaagcctagtgctgcaagtgatgatgaattgctcacttatgatccagcg
agcatcattatatgcgctgttggtgctcggtacaatagctattgctccaatgtcgctagg
acttacctaatagatgcaactcctctccagagcaaggcttatgaagttcttctcaaggca
catgaggctgctattaatgctctgaggccaggaactaagttgaatactatctatcaagct
gccctgtccgtggttgaaaaggaagctcctgagttggttgacaagctaaccaaatctgct
ggtactggtatcggtcttgaattcagagagtctggattgaatattaatgcgaagaatgat
aaagtgttgagatcagagatggcgtttaatgtgtctcttgggttccagaacttggaatgt
gaggaggagagccgcagcaagaacaagaaattctcgctattactggctgatactgttatt
gttaaagatcagaatcctgagattttgactacaaagtgctccaaagctgtcaaggatgtg
gcttattcattcaaggaggaagaagaagagaagccaaggaagaaggcaaggaccgctgga
ccagagaactacatgacaaaaacagctcttagatcagatgatcatgtggtgtctaaagag
gagctgcggaaacagcaccaggcagagcttgcacgccagaaaaatgaagagactgccaga
aggcttgctggtgacagttccggttctggagaccgccggtctactgcaaagacttccact
gatatggttgcctacaagaacgttaatgatgtgcctcagcctagggatttgatgatccaa
gttgatcagaagaacgaggctttactgttacccatctatggtagcttggttccgttccat
gtatcagcgatcagaacagtatcaaaccagcatgagagcagccagaataactacatccgt
atcattttcaatgtccccggtacacccttcaaccctcctgactctaacactttgaaaaac
cagggagctatatacctcaaggaggtttcattccggtccaaggattcaaagcatagcagt
gaagtggttcaggcgattaagaccctgagacggcaagtcaatgctcgtgagtcggaaaga
atcgaaagggcaacactggtgacccaagagaagcttcagcttgcaggaaacaagttcaaa
cctctcaggttgtctgatctatggatccgtccacagtttagcggtcgcaagaggattcct
ggaacactcgaagctcatgccaatggtttcagatattctacaactaggcccaatgagcgg
gtggatgtcctgtttggaaacattaagcatgcgtttttccagcctgctgagagggagatg
atcaccgtcctgcattttcacctgcacaaccacatcatggtagcaaacaagaaaacaaag
gacgtccagttctatgttgaggtgatggatgttgtgcaatccttaggcggtggaaggaga
tcagcctatgacccagacgagattgatgaagagcagcgggagagggctaggaaaaacaag
atcaacatggacttcaatcattttgcaagccgagtcaatgatatgtggcaacaacctcag
tttgcaagtttggaccttgagtttgatcagccactgagagagcttgggttctatggtgtg
ccacataagacaaacgctttcatcatcccgacctccagctgccttgtagagatcactgaa
atgcccttttttgtggtcagtttgagtgagattgagattgtgaatctggagagagttggg
tttgggcagaagaactttgacatggccataatcttcaaggacttcaagaaagatgttctc
agggttgactctattcccactacttctctagaagggataaaggaatggcttgacactact
gatataaagtactacgagagcaaactgaatctgaactggaggcagatcctcaagacaatc
actgatgatccacagagctttgtagaggaaggtggatgggagtttttgaacttggatgga
agcgattcagaatctggtggctctgaggagtcagacaaagagtatgaggcctcagatgtg
gaggttgagtctgagtcagaggacgaggattcagacagcgcttcactggttgagtcagag
gacgatgaagaagaagactcggaggaagaatcagaggaagagaagggtaagacatgggac
gagctggagagagaagctactaatgcagacagagagcatggagctgagtctgacagtgag
gaagataggaagagaaggaagatgagagcgtttgggaaatcgcgtcctggaaccagcggt
ggtggtggaggcagaagcagcggtggaggaggcagcagcatgaggaacatgccaccatcc
aaacgcaagcacaggtga
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