Brassica napus (rape): 106388904
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Entry
106388904 CDS
T04128
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 2 isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106388904
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106388904
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106388904
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
106388904
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (A)
106388904
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106388904
Prokaryotic type
106388904
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
DUF4435
Motif
Other DBs
NCBI-GeneID:
106388904
NCBI-ProteinID:
XP_013684533
UniProt:
A0A078F8C5
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Position
C3:complement(24627091..24635818)
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AA seq
616 aa
AA seq
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MDSHGKTHQREHEDDVISPKPVALSKYSNRVELKTLLERSDGGARLAGKRVVIGGWVKSS
RAVKKDSPPPPPPQPSVTVPPPASTKSNISCTEIIQSKMNIFRKLFDVLSGGGKTTYPIF
DKPEITGQKATSPPEYTIYFLISDGSSVSSLQVVVDSAMSTIPATQLMSLGTCIVAEGVL
RHPLAASAKHVIELEAEKLLHVGTVDPEKYPLSKKQLPLHLLRDFSHFRPRTTTVGSVTR
VHSALTLASHTFFQSNGFQYVQVPVITTTGFGEMFRVTTTLDREEKKHDGLSIETVKAAI
KEKTRLIDHLKRSDSNREAVAAAVHDLKKTTDLAAQLEKKQKPQKLDFFGCDTYLTVSGR
FHLESYASALGKVYTFGPRFTADKIDNARHLAEMWNVEAEIAFSELDDAMDCADDFFKFL
CRYLLENRHEDMKFISKRVDKTVTTRLEATASNSLLRFSYTEAISLLQKATTRTFETKPK
WGVALKEEHLSYLTDEICKGSVMIIHSYPKEVKPFYIRLNEDKKTVAAFDLVVPKVGVVI
SGSQNEERFEILDARIRELGSTSREKYEWYLDLRRHGTVKHSGMSLRMEHMLLFATGLPD
IKDAVPFPRSWGKANN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggattctcacgggaaaacacatcagagagagcatgaagatgacgtcatctctccgaaa
cccgttgccttgtcgaagtactcgaaccgagtcgagttaaagactctcctcgaacgcagc
gacggcggcgcaagattagccgggaaaagggtcgtgatcggcgggtgggttaagtcttct
cgagccgttaagaaagactctccacctccacctccgccgcagccgtcagtaacagtccct
ccgccagcgtcgacgaagtccaacattagctgcaccgagatcatacagtcaaagatgaat
attttcagaaagcttttcgatgtcttgagcggcggcggaaagacgacttacccaattttc
gataaaccggagataaccggtcagaaagccacgtcaccacctgagtatactatatacttc
ttgatcagtgatggctcctctgtctccagtctccaggttgttgttgattctgcaatgtcg
actattccagcaactcagcttatgtctctagggacatgtatcgtagcagaaggtgtgcta
agacatcccctggctgcctctgcaaaacacgtgatcgagcttgaggcagagaagcttctt
cacgtaggaactgttgatccagagaagtatccactctccaagaaacagcttcctctgcat
ttgcttagagacttctctcacttcaggccccgcacaactacggttggatcggtgactcga
gtccacagtgcgttaaccttagcgagccacacgttctttcaatctaatgggtttcagtat
gttcaagtaccagttatcacaaccactggattcggcgagatgtttagagtcactactact
cttgatagagaggagaagaagcatgatggattgagcattgagacagtaaaggctgcaata
aaggagaagactaggctcattgaccaccttaagagatctgacagcaaccgagaagctgtg
gctgctgctgtacacgacttgaagaaaacgaccgatcttgcagctcagcttgagaagaaa
caaaaacctcagaagcttgatttctttggctgtgacacttatctgactgtgtctgggagg
ttccatctcgagagctatgcttctgcgcttggaaaggtttatacctttggaccgagattc
acagctgataaaatcgataacgcgagacatttggcagagatgtggaatgtggaagctgag
atagctttctctgaattggatgatgctatggactgtgctgatgacttcttcaagttcctc
tgcagatatcttcttgaaaatcgtcatgaagatatgaagttcatatctaaacgagttgac
aagaccgttaccacacgtcttgaagcaacagcttccaattctcttttgagattctcttat
actgaagcgattagtcttcttcaaaaggcaaccactagaacattcgaaaccaagcctaag
tggggcgttgctttaaaagaggagcatctcagttatctaactgatgagatctgcaagggc
tctgtaatgatcatacatagctacccgaaggaggttaaaccgttttatataaggttgaat
gaggataagaagactgtagcagcgtttgatctggtcgtaccaaaggttggtgttgtgatc
agtgggagccaaaacgaagaacggtttgagattttggatgcgaggatcagggagcttgga
tcaacatcaagggagaagtacgagtggtacttggatttaaggaggcatgggacagtgaag
cattcggggatgagcctaaggatggaacatatgcttctgtttgctactgggcttcctgat
atcaaagacgcggttcctttcccaagaagttggggtaaagcaaacaattaa
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