Brassica napus (rape): 106388915
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Entry
106388915 CDS
T04128
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106388915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106388915
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106388915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
106388915
NCBI-ProteinID:
XP_013684543
LinkDB
All DBs
Position
C3:complement(24488627..24494251)
Genome browser
AA seq
1015 aa
AA seq
DB search
MNTENQGYPNFPARPPPFSSSPFASAPPPQSGGPESVGFRPPTRPFTPSGPPMAPPVGVM
RPFQPPLVSQIPGQGIRPPPPPPSFPSTAYGPPGGGSFQRFPTPPPPSGPPPTQTLAGHF
SPPMQPMGPPMQPMGPPMQPMGPPMQPMGPPPQSMTSGVPGGYASPPGAGFQQSMPPVNP
SYPGVGGPQPSFPGYPSNQVTPVPFQSASQGPPSSYPPQTGGFSQHPGQQNLHPSYAPPT
SNVQGLTEDFNSLSLTNIPGSLEPGLDQASFPRPLDGDVDPNTFAEMYPMNCHSRYLRLT
TSAIPSSQSLASRWHLPLGAVVCPLAEAPEGEEVPLIDFGSSGIIRCRRCRTYVNPYVSF
TDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPM
PPIYFFLIDVSFSAAKSGMLEVAAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSL
SQPQMMVVSDLDDIFVPLPDDLLVNLSESRNVVEAFLDSLPLMFQNNVNVESAFGPALKA
AYMVMNQLGGKLLIFQNSLPSLGVARLKLRGDDPRVYGTDKEYTLRVAEDNFYKQMAADC
TKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGDTLRHELARDLTRET
AWESVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLTLEETLLTTPTVYF
QVALLYTASCGERRIRVHTAVAPVVTDLGEMYRQADTGSIVSVYTRLAIEKTLSGKLDDA
RNVIQQKIVKALREYRNLHSVQHRLGSRLIYPESLKFLPLYGLAICKSTPLQGGPADTSL
DERCAAGLTMMALPVKKLLKLLYPNLFRVDEWLLKPSADLDDLKDVLRRLPLAAQSLDSR
GLYIYDDGFRLVLWFGRMLSPDIAKNLLGADFAAELSRVTLQEQENGMSKKLMRLIKKVR
ESDPSYHPMCFLVRQGEQPREGFLLLRHLIEDQMGGSTSYVDWILQIHRQVQQNA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggagaatcaaggttatccgaattttccagctaggcctcctccgttctcctcc
tctccattcgcatctgctccgccgcctcaatccggtggaccagagagtgttggatttagg
ccacctactagacctttcacaccttctggtcctcctatggctccaccagtgggtgtgatg
aggcctttccagcctcctttggtttctcagattccaggtcaagggattagacctccacct
ccaccgccttcgtttccttctacagcttatggtcctcctggtggcggctcttttcagcgg
tttccaactcctcctcctcctagtggtccaccaccaactcaaacgcttgcaggtcacttc
tcgcctccaatgcaaccaatggggcctccaatgcaaccaatggggcctccaatgcaacca
atggggcctccaatgcaaccaatggggcctccgccacaaagtatgacttctggggtacct
ggaggatatgcttctccccctggggctggttttcaacagtcaatgcctccagttaatccg
tcgtatcctggtgttggtggtccacagccttcttttcctggttatcccagcaatcaggtt
accccagtgccattccagtctgcatctcaaggtcctccgtcatcatatcctcctcagacg
ggagggttttctcagcatccaggacagcagaacctgcatccaagctatgcacctccgacc
agcaacgtacaaggcttaactgaagatttcaattccctgtcccttacaaatattccggga
tcgcttgagccaggacttgatcaagcctcgtttccaaggccattggatggtgacgtggac
ccaaatacgtttgctgaaatgtaccctatgaattgccattctagatatctacgtctgaca
actagtgctataccaagttcccagtctctggcgtcgaggtggcatttacctctaggagct
gtggtttgtcctcttgctgaggctcctgaaggggaggaagtaccacttattgattttgga
tcaagtggcatcatccgctgcagaagatgccgtacctatgtgaatccttatgtgagcttt
acagattctggaagaaagtggcggtgtaatatttgttctatgcttaatgatgtacctggt
gaatacttctcacatttggatgctactggccgaagaatggacatggatcaacggcctgag
ctgacaaagggcagtgttgaaatcattgctccaacagaatacatggttcggcctccgatg
ccacccatctacttcttcctcattgatgtttcattttcggctgctaaaagtgggatgctt
gaggttgctgctcaaacgattaagtcttgtttggataacctgcctggttatcccagaact
caaattggatttattacttatgacagcacgttacatttttacaacatgaagtcgtctttg
agccagccgcaaatgatggtggtttcagatttagatgatatatttgtaccgttgccggat
gatctcctggtcaatctatctgaatcaagaaatgtggtggaagcctttttagacagcctg
cctctgatgtttcaaaataatgtcaatgtggaatcggcttttggtccagctctcaaagcg
gcgtacatggtcatgaaccaacttggtggcaagttgttaattttccagaactcgttacct
tctctgggtgttgcgcgattaaagttgcgcggagatgatcctcgtgtctatggaactgac
aaagaatatactttaagggtagcggaagacaacttctataagcaaatggctgccgattgt
accaagttccagataggaattaatgtttatgcattcagtgataagtacactgatattgcc
tccttagggactctggctaaatacactggaggacaggtgtactattatccaggcttccaa
tcatctattcatggagatacgttaagacacgaactggctagagaccttacaagggaaact
gcttgggaatccgttatgcgaataagatgtggaaaaggaattcgtttctcttcctaccat
gggaacttcatgctaaggtctactgacctgcttgctcttcctgctgttgactgtgacaaa
gcatatgcaatgcagctaactctggaagagacattgctaacaaccccgacggtgtatttc
caagtcgctctactatatactgcttcttgcggagagaggcgtataagggtacacacagct
gttgcaccagtggttacagatcttggagagatgtatagacaagcagacaccggttccatt
gtctctgtatatactagattagcaattgagaaaactttgtccggaaaattggatgatgca
agaaatgttatacaacaaaagattgttaaagctctcagagagtatcggaatcttcactcg
gtgcagcatcggttggggtctagattaatatacccagagtctctgaagttcttgccattg
tacggactggcaatatgtaagtccactcctcttcaaggtggacctgccgatacttcactt
gacgagcgctgtgcggcaggcctcaccatgatggctctgcctgtcaaaaagctattgaag
ctgttatatcccaatttattccgtgttgacgagtggctcttaaagccatcagcagacctt
gatgacctcaaggacgtactaaggagattgcctctggctgctcagagtttggattctaga
ggactttacatttatgatgatggttttcggttggttttgtggtttggccggatgctttca
cctgacattgctaaaaatcttcttggagctgactttgcagcagagctctcaagggttaca
ctgcaagagcaagagaatgggatgtcgaagaagctaatgagactgataaagaaagtgagg
gagagtgatccatcatatcatcccatgtgtttcctagtgaggcaaggagaacaaccccga
gaaggcttccttctcctccgacatctcattgaggaccagatgggcggttcgactagttat
gttgattggattcttcaaattcaccgccaagtccaacaaaatgcgtga
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