Brassica napus (rape): 106389369
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Entry
106389369 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase 4 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106389369
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106389369
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106389369
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106389369
NCBI-ProteinID:
XP_013685048
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Position
C3:complement(30923011..30927565)
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AA seq
572 aa
AA seq
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MVLQQQQQTLFVTKKTDQELPLKTDPEPSREFIFRSKLPDISIPNHLPLTDYVFQKFSGD
GDGDSTATCLINGATGRIFTYGDVQISLRRIAAGIHRLGIRQRDTVMLLLPNSPEFALSF
LAVAYLGAVSTTANPFYTKSEIEKQAKASATKMIITKPCYVDKLTNLKNDGVLIVCVEDE
NDAVPVADGCVSFKELAQADETELPKPEISPEDTVAMPYSSGTTGLPKGVMITHKGLVTS
IAQKVDGENPNVNFTGDDVILCFLPMFHIYALDALMLSAMRTGAAILIVPRFELNLVMEL
IQRYKVTVVPVAPPVVLAFVKSQETERYDLSSVRMMLSGAATLKKELEDAVRLKFPNAIF
GQGYGMTESGTVAKSLAFAKNPFKTKSGACGTVIRNADMKVVDTITGVSLPRNKPGEICI
RGDQLMKGYLNDPEATAITIDKDGWLHTGDIGFVDDDDEVFIVDRLKELIKFKGYQVAPA
ELEALLISHPYIEDAAVVAMKDEVADEVPVAYVVRSEGSQLTEDDVKSYVNKQVVHYKRI
KMVFFIEAIPKAVSGKILRKELRAKLESEYPK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccaacaacaacaacaaacgctttttgtcacaaagaagacagatcaagaactt
cctcttaagacagatccagagccttctcgtgaattcattttccggtccaaacttcccgac
atctccatccctaatcatcttcctctcaccgattacgtcttccagaagttctccggcgac
ggcgacggagactccacagccacatgtctcatcaacggtgccaccggacgtatctttacc
tacggtgatgtacaaatcagtttacggcgtatcgccgccgggatccatcggctagggatc
cgccaacgtgacaccgtcatgctccttctcccaaactcgccggagtttgctctctccttc
ctcgccgtcgcttacctcggagccgtatccaccactgcgaatccgttctatacaaagtca
gagatagagaaacaagcaaaagcttccgccacgaaaatgatcatcactaagccatgttac
gttgataaacttacaaacctgaagaacgacggcgttttgatcgtttgcgtggaagatgaa
aacgacgcagttccagtagctgacggttgtgtgagtttcaaggaactggctcaagcggac
gaaacagagcttccgaaaccggagatctcaccggaagacactgtagcgatgccgtactcc
tccggaaccacggggcttccgaagggagtgatgatcactcacaagggattagttacgagc
atcgctcagaaagtagacggagaaaaccctaacgtcaacttcaccggagatgacgtcatt
ctatgtttcctccctatgtttcacatttacgcgctcgacgcgttgatgctctcggctatg
aggacgggtgcggcgatcttgatcgttccgaggttcgagttgaatctggtgatggagctt
attcagaggtataaggtcaccgtggttccggtggctcctccggtggttctagcgtttgtt
aagtctcaggagacggagaggtatgacctgagctcagtgaggatgatgctttcaggcgca
gctacgctcaagaaggagcttgaagacgccgtgcgtctcaagtttcccaatgccatattt
ggacagggttatggaatgactgagtcaggaacggtggctaagtcattagcgtttgcaaag
aacccattcaagaccaagtctggtgcgtgcgggactgtgatcagaaacgcggatatgaaa
gtggtcgacaccataaccggagtctctttaccacgcaacaaacctggcgaaatatgcatc
cgaggtgatcaactcatgaaaggttatttgaatgatccggaggcgactgcgataaccata
gacaaagacgggtggttacacacaggagatattgggtttgtggatgatgacgatgaggtc
ttcattgttgataggttaaaggaacttatcaaatttaaaggttatcaagtggctccagct
gagcttgaagcattgcttatttctcatccttacatcgaggatgctgcagttgtcgcgatg
aaggatgaagttgctgatgaggttccagtagcatatgtggttagatcagaagggtctcag
ttaaccgaagatgatgtcaagagttatgtcaacaaacaggtggttcattacaagagaatc
aagatggtgtttttcatagaagcaattccgaaagcagtgtccggaaagattctgaggaag
gaactccgagctaaactggaatctgagtaccctaaatag
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