Brassica napus (rape): 106389700
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Entry
106389700 CDS
T04128
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106389700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106389700
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106389700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
MRNIP
Motif
Other DBs
NCBI-GeneID:
106389700
NCBI-ProteinID:
XP_013685482
LinkDB
All DBs
Position
A1:29210089..29215589
Genome browser
AA seq
994 aa
AA seq
DB search
MGTENQGYPSFPARPPPPPSSSSSPFASAPPPGGAQTVGFRPPSSQPTRPFTPSGPPMAP
PPVGVMRPGQSPFVSQIPGSRPPPPAYGGPPGGGGGGGGGSFQRFPAPPPPFPGSQNPPL
SGPPATQTLAGHLSPPMSLRPQQPMGPGGYASPPGPGFQQPVPPGVGGGPQPSFPGYPSN
QAPPMSLSQGPRPTYPPQTGGFGQHPGQQNLHPSYAPPTSNVQGLAEDFNSLSLSNIPGS
LEPGLDPSSFPRPLDGDVEPNSFAEMYPMNCHSRYLRLTTSAIPSSQSLASRWHLPLGAV
VCPLAEAPEGEEVPLVDFGSSGIIRCRRCRTYMNPYVTFTDSGRKWRCNICSMLNDVPGE
YFSHLDATGRRMDMDQRPELTQGSVDFIAPTEYMVRPPMPPTYFFLIDVSFSATKSGMLE
VAAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNLKSSLSQPQMMVVSDLDDIFIPLPDD
LLVNLSESRNVVEAFLDGLPLMFQDNVNVESAFGPAVKAAFMVMNQLGGKLLIFQNSLPS
LGAGRLKLRGDDPRVYGTDKEYALRVAEDAFYKQMAADCTKFQIAINVYAFSDKYTDIAS
LGTLAKYTGGQVYYYPGFQSSIHGDKLRHELARDLTRETAWESVLRIRCGKGIRCSSYHG
NFMLRSADLLALPAVDCDKAYAVQLALEETLLTTPTVYFQVALLYTASCGERRIRVHTAI
APVVTDLGEMYRQADTGSIVSVYARLAIEKTLSAKLDDARNAIQQKIVKALREYRNLHSV
QHRLGSRLIYPESLKFLPLYGLAICKSTPLHGGPADASLDERSAAGFTMMALPVKKLLKL
LYPSLFRVDEWLLKPSADHDDLKDVLRRLPLAAESLDSRGLYIYDDGFRLVLWFGRMLSP
DIAKCLLGADFAAELSRVTLQEQENGMSKKLMRLIKKVRENDPSYHPMCLLVRQGEQPRE
GFLLLRNLIDDQMGGSTGYVDWMLQLHRQVQQNA
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgagaatcaaggctatccgagttttccagctaggcctcctcctcctccttcg
tcatcctcctctccgtttgcatctgctccgccgccaggtggagcacagactgttgggttt
agaccaccttcttcccaacctacaaggccttttaccccctctggtcctcctatggctcct
ccacctgtgggtgtgatgaggcctgggcagtctccttttgtttctcagattccagggagt
agacctcctccgccagcttacggaggccctcctggtggtggtggtggtggtggtggtggc
tcttttcaacgttttccagctcctcctcctccgttcccgggtagtcaaaaccctcctctt
agtggtccaccagctactcaaactcttgcaggtcacttatcgcctcccatgtctctccgc
ccacagcaaccaatgggacctggagggtatgcttctcctcctggtcctggttttcaacaa
ccggtgcctcctggcgttggtggtggtccacagccatcttttcctggttatcccagcaac
caggctcctccaatgtcattatctcagggacctcggcctacatatcctcctcagacagga
ggttttggtcagcacccaggacagcagaacctgcatccgagctatgcacctcctaccagc
aacgtccaaggcttggctgaagatttcaattcgctatccctttcgaatattccgggatcg
cttgagccaggacttgatccttcctcattcccaagaccattggatggtgacgtggagcca
aattcatttgctgaaatgtaccctatgaattgtcattcgagatatctacggctgacaact
agtgctataccaagttcccagtctctggcgtcgaggtggcatttacctctaggagctgtg
gtttgtccacttgctgaggctcctgaaggggaggaagtaccacttgttgattttggctca
agtggcatcatccgttgcagaagatgccgtacctatatgaatccttatgtgacttttaca
gattctggaagaaagtggcggtgcaacatttgttctatgcttaatgatgtgcctggtgaa
tacttttcacatttggatgctactggccgaagaatggacatggatcaacggcctgagctg
acccaaggcagtgttgatttcatagctccaacagagtacatggttcggcctccgatgcca
ccaacatacttcttcctcattgatgtttcattttcggctactaaaagtgggatgcttgag
gttgctgctcaaacgattaagtcttgtcttgataacttgcctggttatcccagaactcaa
attggatttattacttatgacagcactttgcatttttacaacctgaagtcatctctgagc
caaccacaaatgatggtggtttctgatctggatgatatatttatcccattgccggatgat
ctccttgtcaatctatctgaatctagaaatgtggtggaagcctttttagacggtctgcct
cttatgtttcaagataatgtcaatgtggaatcggcttttggtccagccgtcaaagcagcg
tttatggttatgaaccaacttggtggcaagttgctaattttccagaactcgttaccttct
cttggtgctgggcggttaaagctgcgcggagatgatcctcgtgtctatggaactgacaaa
gaatatgctttaagggtagctgaagacgccttctataagcaaatggctgccgattgtacc
aagttccagattgcaattaatgtttatgcattcagtgataagtacactgacattgcctcc
ttagggacgctggcaaaatacactggtggacaggtgtactactatccaggcttccaatca
tccatccatggagataagttaagacacgagctggctagagaccttacaagggaaactgcc
tgggaatcagttttgcgaataagatgtggaaaaggaattcgttgctcgtcctaccatggg
aacttcatgctaaggtctgccgacctgcttgctcttcctgctgttgactgtgacaaagca
tatgcagtgcagctagctctggaagagacattgctaacaaccccgactgtgtatttccaa
gtcgctttactatatactgcttcttgcggagagaggcgtataagggtacacacagctatt
gcaccagtggttacagatctcggagagatgtatagacaagcagacactggctccattgtc
tctgtatatgctagattagcaattgagaaaactttgtccgcaaaattggatgatgcacgg
aatgctatacagcaaaagattgttaaagctctcagagaatatcgtaatcttcactcggtg
cagcatcggttggggtctagattaatatacccagagtctctgaagttcttgccattgtac
ggattggccatttgtaagtccactcctcttcatggtggaccagctgatgcttcactcgac
gagcgctctgcggcaggcttcaccatgatggccctgcctgtcaaaaagctattgaagctg
ttatatcccagtttattccgtgttgacgagtggctcttaaagccatcggcagaccatgat
gaccttaaggacgtattaaggagattgcctctggctgcagagagtttggattctagaggc
ctttacatttacgatgatgggtttcgattggtgttgtggtttggtcggatgctttcacct
gacattgctaaatgtcttcttggggctgactttgcagcagagctctcaagggttacactg
caagagcaagagaatgggatgtcgaagaagctaatgaggctgataaagaaagtgagggag
aatgatccgtcataccatcccatgtgtttgctagtgaggcaaggagaacaaccccgagaa
ggcttccttctcctcagaaatctcatcgatgaccagatgggcggttcgactggttatgtt
gattggatgctgcaacttcaccgccaagtccaacaaaatgcgtaa
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