Brassica napus (rape): 106396500
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Entry
106396500 CDS
T04128
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106396500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106396500
Spliceosome [BR:
bna03041
]
Complex A
U1 snRNP components
U1 related factors
106396500
Complex B
106396500
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
DUF2605
Motif
Other DBs
NCBI-GeneID:
106396500
NCBI-ProteinID:
XP_013692356
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Position
C4:22552574..22556938
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AA seq
876 aa
AA seq
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MADDSSSPATVDPNSHKPGPSTPNPLSTPPPQQQLSQPQIAPLDPTKPPIFQPGPPYAPS
GSLVPNLPPPPPFRPGVQFTQASNYQTPNSGVPPPPPPPPGSIPYPGQPMRPFTPMANGY
PGIHGVPPPGLVRYPSLYPTMVRPGFITPPPGTVGAVPLVQRPLIPGMPGLRPVMSPMTR
PALVPFVLQVEKPQTTIYIGKIATVENDFMMSILEFCGHVKSCKRAEDPTTKKPKGFGFY
EFESAEESLRAIRLLTKLTIDGQELLVNVNQATKEYLLKYVEKKIDNAKKAKESQAVGTE
DNQGEKAVISAAPTVGEMGKDGEPKSKENIDIANSAVLTDEEREADKEAKEKIDNAIEER
SKANPLPPPPPPPPADGSGIELAFKSRDGDSNTDIARSESAANDVETPGEHNRPDTSSPD
WSKRNDRRSRDRGEKEQEMDRHEREAERERLRKEREHRRKLEDAERAYQTRLRQWERKER
EKEKERQYEKEKEKDKERKRKKEIRYEEEEDEDDVDSRRRWHRGADERRRRRLREKEDDL
ADRLKEEVAEAKRIAEEEKLQQQQLDALRLLSGHAVIGSEPSKTTTKENDNKAALQTVGE
SVHEQHRSDIEQNGSGNEMSMAVDNNSGSEAHAPSKKLGFGLFGSGKRTSVPSVFCEEDE
EEAHKDKKMKPLVPIDYSAEEQEAVAHGGSGNTPPHLALAAEFAKRISSTNPKEETADTD
THRSRRSLHKPSHREREREKNRDRARDRGDGHGDGKDSGTAKTPDTKKLMDAKQLIDTIP
KTKEELFSYEINWAMYDQHQLHERMRPWISKKIMEFLGEEEATLVDFIVSNTQQHVKASK
MLELLQSILDEEAEMFVLKMWRMLIFEIKRVEAGVR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgattcttcctcgccggcgacggtagatcccaattcgcacaaaccagggcca
tctactccaaatcctttatcaaccccaccgcctcaacaacaactttcgcagccgcaaatc
gctccgctcgatccaaccaaaccaccgatctttcaaccaggtccgccttatgctccgtct
ggctcacttgtccccaatcttccgccgccaccaccattccgtcccggtgtgcagttcact
caggcttccaactatcaaacccctaactcgggagttcctcctcctcctcctcctcctcca
ggatccattccttatcctggccagcctatgcgacctttcacgcctatggctaatggttat
cccggaatccatggtgttcctcctcctgggcttgtccggtatccttctctatatccaacc
atggttcgtccgggttttattacgcccccccctggtacagtcggtgctgtgccgcttgta
caacgcccacttatcccgggaatgcctggtctccgtcccgtaatgtcccctatgactaga
ccagctcttgttcctttcgtactacaagtagagaaaccccagaccacaatctacattggc
aagatagcaaccgtggaaaatgacttcatgatgtctatcctcgagttttgtggccatgtc
aaaagctgtaaacgcgcggaagatcccaccaccaagaaacctaaaggttttggattctat
gaattcgaatcagctgaagagagtcttcgtgcaatacgcctgcttaccaaactaactata
gatggacaagagcttttggtaaatgttaatcaagcaacaaaggaatatttgctaaaatat
gttgagaagaaaatagacaatgcaaagaaagcgaaggaaagtcaagctgtaggaaccgaa
gataaccaaggtgaaaaagctgtaatatctgcggcgcccaccgttggggagatgggaaag
gatggagaaccaaagagtaaagaaaacattgatattgctaattctgcagttctaactgat
gaagaaagagaagctgacaaagaggctaaagagaagattgacaatgctattgaagaaagg
tcaaaggccaaccctctgccgcccccacccccaccaccacctgctgatggttcaggcata
gaacttgccttcaaatctagggacggagactccaacactgacatagctcgaagtgaatcc
gctgcaaatgatgttgagactcctggagaacacaataggcctgacacaagttcacctgat
tggagtaagagaaatgaccgacgaagcagagacaggggtgaaaaggagcaagaaatggat
agacatgagagggaggcagaacgagaacgtttaaggaaagagagagagcacaggaggaaa
cttgaggatgcggaacgtgcttaccagactcgtcttcgacaatgggaacgcaaagaaaga
gaaaaagagaaggaacgacagtatgagaaggagaaggagaaagacaaagagcgtaagagg
aaaaaggaaatccgctatgaggaagaggaggatgaagatgatgttgattcaagaagaaga
tggcataggggtgcagacgagagaagaagacggcggctaagagagaaggaggatgactta
gctgatagactgaaagaagaggttgcggaggcaaagaggattgccgaggaagaaaagttg
cagcaacaacagttagatgccttaaggctcctatctggacatgcagttattggaagcgaa
ccgagtaagacaacaaccaaagaaaacgataataaggcagctctccaaactgtaggtgaa
tctgtccatgagcaacatagatcagatattgaacaaaatggttctggtaatgaaatgtcc
atggctgttgataataacagtggctcagaggcacatgctccatccaagaaattgggattt
gggcttttcgggtccggaaagcgaacttctgtgccttctgttttctgtgaggaggatgaa
gaggaagcgcataaggataagaagatgaagcctttggttcctatagattactcagccgag
gaacaggaagcagtggcccatggtggctcagggaatacaccacctcatttggctttagcc
gctgaatttgcgaaacgaatttcgagtactaatcccaaggaagagacagcagacaccgat
acacataggagcagacggtctcttcataagccaagccaccgggaaagagaacgggaaaag
aacagagacagagccagggaccgaggcgacgggcatggtgacggtaaagattctggaaca
gcaaagacacctgatactaagaagctgatggatgcgaaacaattgatagatacaatccca
aagacaaaggaagagttattttcttacgagataaactgggctatgtatgaccagcaccaa
ttgcacgaaagaatgaggccatggatatcaaagaaaatcatggagtttcttggagaagag
gaagccacactggtagatttcattgtgtcaaacactcaacagcacgtgaaagcctctaaa
atgcttgagctattgcaatcaatactagacgaagaagctgagatgtttgtgctcaagatg
tggagaatgctcatcttcgagatcaagcgggtcgaagctggtgtccggtaa
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