Brassica napus (rape): 106397425
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Entry
106397425 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase 4
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106397425
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106397425
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106397425
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106397425
NCBI-ProteinID:
XP_013693459
UniProt:
A0A816LH89
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Position
C5:40820611..40825577
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AA seq
553 aa
AA seq
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MAFRQQETLSLTKKTDQDFIFRSKLPDISIPNHLPLAEYVFQKFSGDGDGDSTTTCLIDS
ATGRTFTYANVQITLRRIAAGLHRLGIRHGDTVMLLLPNSPEFALSFLAAVYLGAVSTSA
NPLFTQTEIAKQAKASAAKMIITKPCYVHKLTNLQQLGAVIVCVDDRNDVVSLADGSVRF
TDLTQADEAELPKPEISPDDTVSIPYSSGTTGLPKGVMISHKGLVTSIAQKVDGENPNLN
FTRDDVIICFLPMFHTFTHSSLMLSAMRTGAALLILPRFELNLVMKMVQKYKVTVVPMAP
PVVLAFVKSPETEKYDLSSVRMMLSGSATLKKELEDAVRLKLPNAIFGQSYGMTEAGTVA
NSLAFAKHPFKTKSGSCGTVIRNAEMKVVDTITGASLPRNKAGEICIRGHQLMKGYLNDP
EATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLIFHPYIE
DAAVVAMTDEVADEVPVAFVVRSEGSQLTEDDIKNYVNKQVVHYKRIKMVFFVKAIPKSA
SGKLLRKVLRAKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccgacaacaagaaacactttctcttacaaaaaagacagatcaagatttcatt
ttccggtccaaacttcccgatatctccattccaaaccaccttcctcttgccgagtacgtc
ttccagaagttctccggcgacggagacggcgattccaccaccacatgcctcatagacagt
gccaccggacgtaccttcacctacgccaacgtgcagatcactttacggcggatcgctgcc
ggactccacaggctagggatccgccacggtgacaccgtgatgctccttctcccaaactcg
ccggagtttgctctatctttcctcgccgcggtttacctgggagccgtatcgacctccgct
aatccgctatttacccaaacggagattgcaaaacaggcaaaagcctccgccgcgaagatg
atcatcacgaaaccatgttacgtccataaactaacaaaccttcaacagcttggtgctgtc
atcgtttgtgtagacgacagaaatgacgtcgtttcgttagctgacggttccgtgaggttc
acggatctgactcaagcggacgaggcagagcttccgaagcctgagatctcaccggatgat
acggtgtcgattccgtactcctccgggaccacgggacttccaaagggagtgatgattagc
cacaagggattagttacgagcattgctcagaaagtagacggagaaaaccctaatctcaac
ttcaccagagatgacgtcatcatctgtttcctcccaatgtttcacactttcacgcacagc
tcgttgatgctttcggcgatgaggaccggtgccgcgttattgatcttgccgaggttcgag
ttgaatctggtgatgaagatggttcaaaagtataaggtcacggtggttccaatggcccca
ccggtggttctagcgttcgttaagtctccggagacagagaagtacgacctgagctcggtg
aggatgatgctttcaggctcagctacgctcaagaaggagcttgaagacgccgtgcgtctc
aagcttcccaatgccatatttggtcagagttatggaatgaccgaagcaggaacagtggct
aattccctggcatttgcaaagcacccgtttaaaaccaagtctggttcgtgtgggactgtg
atcagaaacgctgagatgaaagtggttgataccattaccggagcctccttaccacgcaac
aaagctggcgaaatatgtatccgaggccatcaactcatgaaaggttatttgaatgatccg
gaggctactgcccgaaccatagataaagacggatggttacacacaggagatattggtttt
gtagatgatgacgacgaaattttcattgttgatcgtttgaaagaactcatcaaattcaaa
ggatatcaagtggctccagctgagcttgaagcattgcttatttttcatccttatatcgaa
gatgctgctgttgtcgcaatgacggatgaagtagctgatgaggttccggtagcgtttgtg
gttagatcggaaggatctcagctaactgaagatgatatcaagaattatgtcaacaaacag
gtggttcactacaagagaatcaagatggtgttttttgtaaaagctataccgaaatcagct
tctggaaagcttttgagaaaagttctccgagctaaactgtaa
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