KEGG   Brassica napus (rape): 106400860
Entry
106400860         CDS       T04128                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106400860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106400860
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106400860
 Complex B
    106400860
 Complex C
   U2 SnRNP specific factors
    106400860
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 106400860
NCBI-ProteinID: XP_048614044
LinkDB
Position
C5:7213399..7216292
AA seq 782 aa
MFSSSQILPLEAPPTDGNLGPLPPSQLTDQEAEEKELQSSSNQAPESVATHTRTIGIIHP
PPDIRSIVEKTAQFVSKNGLEFEKRIIASNAKNAKFNFLTSSDPYHAFYQHKLAEYRAQN
QDGAQGDDTDGPDGASLQLDGGDGDGDGEAGEAQADLQAQFRVPPKPLEPPEPEKYTVRL
PEGITGEELEYIKLTAQFVARNGKSFLTGLQSRESNNPQFHFMKPTHSLFSFFTALVDAY
FDVLKPPEDLKEKLRKSAADLTTVLETCLHRLEWDRSQEQQRKKEEDEKEQERVQMAMID
WHDFVVVESIDFADEEDDELPPPMTLEEVIRRSKVSSAMEEDEVVEPGKEVEMEMDEEEV
RLVAEGMRAANLEANGGSVKIETLNDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITG
ELIPISEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGT
TEEEVSNAVKAEIEKKKDEQPSQVIWDGHTGSIGRTANQALAQNANGEEQYGDPNSFPGP
AALPPPRPGVPIARPLPPPPNLALNVPRPPPSVQYPGPPRPLGVPMMQPMHPQHQLSMPG
PPGHQPMMMNRPPQMQHGMPVPPPPGSQFAHLQVPRPYGQLPPTMHGMMQPPPMHGMPPP
PPHEEAPPPLPEEPEPKRQKFDESALVPEEQFLAQHPGSATIRVSVPNVDDGQVIEITVQ
SLSENVGSLKEKIAGETQIPANKQKLSGKAGFLKDNLSLAHYNVGAGEMLTLSLRERGGR
KR
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgttcagttcgtcgcagatactcccactcgaggctcctcccaccgacggcaacctcggt
ccgcttcctccttcgcagctaacggatcaggaagccgaagagaaagagcttcaaagcagc
tcaaaccaagctccggagtctgtagccactcacacgaggaccatcggaatcattcaccct
cctccggatatcagaagtattgtagagaagactgctcagttcgtctccaagaacggtttg
gagttcgagaagaggatcatcgccagcaatgccaagaacgctaagttcaactttttgacg
agttcagatccttatcacgccttttaccagcacaagcttgctgagtaccgtgctcagaat
caagatggagctcagggtgatgatactgacggtcctgatggtgcaagtcttcagcttgat
ggtggtgatggtgatggtgatggtgaagcaggtgaggcacaggcggaccttcaggctcag
tttcgggttccccctaagcctcttgagcctcctgagcctgagaagtatacagttagactt
cctgaagggattacaggggaggagcttgagtatattaagctcacggcgcagtttgtggcg
cggaatgggaaatctttcttgactgggttgcagagtagagagagtaacaatcctcagttt
cattttatgaagccaactcatagtttgttctcttttttcactgctctggttgatgcgtac
tttgatgtgctaaagcctcctgaagacttgaaggagaagctgaggaagagcgctgctgat
ttgactactgttcttgagacctgtttgcatcgtcttgaatgggatcgttctcaggagcaa
cagaggaagaaggaagaggacgagaaagagcaggagagagtgcagatggctatgattgat
tggcatgacttcgtggttgttgaatcgattgattttgccgacgaggaggacgatgagttg
ccaccgcctatgacgctcgaggaagtcataaggaggagcaaagtatcatcagcgatggag
gaagatgaagttgtggagcctggaaaggaagtcgagatggaaatggatgaagaagaagtc
aggcttgttgcggaaggaatgagagcagcgaacttggaagcgaatggtggctctgtaaag
attgaaactttgaacgatgaggaagcacctatgaggattgttaagaactggaagaggcca
gaagataggatcccgacagagagagatcctactaaagttgttatatctccaattactggc
gagctgattcctattagcgagatgtctgagcacatgcggatttcgcttattgatcctaag
ttcaaagagcagaaggatcggatgtttgctaagattcgcgagactactcttgcacaagac
gacgagattgctaagaacatagtcgggcttgctcgtctgcgtcctgatattttcgggaca
acagaagaagaagtctcaaatgctgtaaaagcagagattgagaagaagaaagatgagcag
ccaagtcaagtaatatgggatggtcacacaggaagtataggtcgcacagcaaaccaagcc
ttggctcagaatgctaatggagaggagcaatatggagatccaaatagcttccctggtcca
gctgctcttcctcctcctcgaccaggcgtcccaatagccaggccattgccaccacctccc
aatctcgccttgaacgtgcctcgccctcctccgtctgttcaataccccggtccgcccagg
ccattaggtgttccaatgatgcaacccatgcatccacaacaccagctctcgatgcctggg
ccacctggacaccagccgatgatgatgaaccggcctccacaaatgcagcatggcatgcct
gtgccgcctccaccgggatcacaatttgctcatcttcaagttccaagaccatatggtcag
cttccaccaactatgcatgggatgatgcaaccaccacctatgcatgggatgccgcctcca
ccaccacatgaggaggcaccgccgcctcttcctgaggagccagagccaaagagacaaaaa
ttcgacgagtcggctcttgttccagaagaacagttccttgctcagcatccgggttctgct
acgatcagggtctctgttccaaacgtggatgatgggcaggtcattgagatcacggtgcag
tcattatccgaaaacgtgggaagtttgaaagagaagatagctggtgaaacacagattcca
gcaaacaaacagaagttgagtggaaaagctggattcttaaaggacaacttgtcacttgca
cattacaatgttggagcaggtgaaatgttaacactgtctttgagagaacgtggtgggaga
aagagatag

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