Brassica napus (rape): 106401188
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Entry
106401188 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Organism
bna
Brassica napus (rape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_1
LRR_4
APH
ABC1
DUF6548
DUF4366
YqzE
CrgA
PIP49_C
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
106401188
NCBI-ProteinID:
XP_013697108
UniProt:
A0A816JW88
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Position
C4:55540374..55542596
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AA seq
639 aa
AA seq
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MIHMAVPTGYAHLFLRPFILTVPLLFFLPSPFVSSVEIDSSDLKALQVIETELVVNSQRS
PSSSSVNPCGLRGVSCERRHSDATGEYVLRVTRLEYRSRYLAGTISPVIGMLSELKELTL
SNNKLVGGLLLDVLNCKKLEVLDVRNNRLSGQIPGNFSGLINLRIINLSSNKFSGNLNFL
KNLRSLESLSVANNLFSGKIPEPVVSFHNLWFFDFSENRLLEGPVPVMSKIKISPYQTRH
ILAETPSTNSTKKPNNTTTTKATGSPPKDEKKKKKKKKKKNKRKKVVAWILGFIVVGIGG
IISGVIFRLILKARRGPEKPLSPTIFSLLIKRAEDLAFLENEESLASLKLIGKGGCGEVF
KAKLPGSNGKIIAVKRVTQPCKSATELIDEESRFLNRYMMQIRSEIITVGHIRHRNLLPL
LAHVPRLECHFLVYEYMKNGSLQDILTEVSGGNKELTWPARHKLALGIAAGLEYLHMESK
PRIIHRDLKPANVLLDDDMEARITDFGLARAMPDAVTHITTSKLSGTVGYIAPEYHQTLK
FTDKCDIYSFGVILGVLVIGKLPSDEFFHRTDGMSLIKWMRKVLTSENPSLAIDPKLMEQ
GFDEQMLLVLKIACYCTLDDPKQRPNSRDVKTMLSQIKH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattcacatggctgttcccaccggatacgcccatctctttctccggccattcatcctc
accgttcccttacttttttttctcccctctcctttcgtctcctccgttgagatcgattcc
tcagatctcaaagctcttcaagtcatagaaacagagctagtagtcaacagtcaacgctct
ccttcctccagtagcgttaacccgtgcggtctcagaggagtttcctgcgagagacgccac
tccgacgccacgggagaatacgttctccgtgtcacgaggctcgaataccgttcccggtac
ttggcgggaaccatctcaccggttatcggaatgttgtcggagctcaaagaactcactttg
tctaacaacaagctggtcggtggtcttctactggatgtcttaaactgcaagaaactcgaa
gtacttgatgtccgaaacaacagattgtccggtcagattccgggaaacttctccggtttg
atcaatcttagaattataaatctttcttcgaacaaattctctgggaacttgaacttcttg
aagaatttacgcagtcttgagagtctctccgttgcaaacaatctcttctcaggcaagata
ccggagccggttgtgtccttccataatctttggttctttgatttctcagaaaaccggtta
ttggaaggtccggttccggttatgagtaaaatcaagatatctccataccaaacaaggcac
attcttgctgaaactccatctacaaactcaacgaagaaacccaacaacaccaccacaaca
aaagcgacagggtcacctccaaaagacgagaaaaagaaaaagaaaaagaaaaagaagaag
aacaaaaggaagaaagtagttgcatggatcttagggttcatcgtcgtaggcataggcgga
atcatctccggagtgatcttcagattgatcctcaaagcaagaagaggaccagaaaaacca
ttaagtcctactatattcagccttttgatcaagagagccgaagacttagctttcttggag
aacgaagaatcattagcctctcttaagctcatcggcaaaggaggctgcggagaagttttc
aaagccaaactaccaggaagcaacgggaagatcatagccgtcaagagagtgacacaaccc
tgtaaaagcgcaaccgagcttatagacgaagagtccaggtttctgaacaggtacatgatg
caaatcaggtcagagatcatcacagtaggtcatatccggcaccggaatcttctcccgttg
ctagcacacgtcccgagactcgagtgtcacttccttgtctacgagtacatgaagaacggg
agtttgcaagatatactaaccgaggtttcaggtggaaacaaagagctaacgtggccagca
aggcacaagcttgctttaggtatagctgcggggcttgagtatcttcacatggaaagtaaa
cctagaatcatccacagagacttgaagccggctaatgttcttcttgacgacgatatggag
gctagaatcacggatttcgggttggccagggcgatgcctgatgcagtcacgcacattaca
acctctaagctttcaggtaccgtgggatacatagcaccagagtatcatcaaactctcaag
tttacggacaagtgtgacatctatagctttggggtgattcttggggttctggtgattggg
aagcttccttccgatgagtttttccatcgtaccgatgggatgagtcttataaagtggatg
aggaaggtactaacatcggagaatccaagcctagctattgatccgaagctgatggaacaa
gggttcgatgaacagatgcttcttgttctgaagattgcttgttactgtactttggatgat
cctaaacagagaccgaacagcagagatgtcaagactatgctgtcccagatcaagcactag
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