Brassica napus (rape): 106410527
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Entry
106410527 CDS
T04128
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106410527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106410527
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106410527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
106410527
NCBI-ProteinID:
XP_013706494
LinkDB
All DBs
Position
C5:53563797..53569428
Genome browser
AA seq
1006 aa
AA seq
DB search
MNTENRNFPARPPPPPSSSSPFASAPPPGVPPQSGGPEAVGFRPPARPFTPPGPPMAPPA
GVMRPGQPPLVSQLPGSRPPPPSFPSTAYGPPGGGGSFQRFPAPPPPFPATQNPPPSGPP
PPQTLAGHLSPPLSFRPQQPMGPPPPSMTSGLPGGFASPPGPGFQQSMPGGPQPSYPGYS
SNQVLQGPPKPFQSPSQGPPSAVSSYPPQTGGFAQHPGQQNMHPSYAPPPTSNVQGLVED
FNSLSLSNIPGSLEPGLDHTSFPRPLDGDVEPSSFAEAHPMNCHSRYLRLTTSAIPNSQS
LASRWHLPLGAVVCPLAEAPEGEEVPLIDFGSSGIIRCRRCRTYVNPYVTFTDSGRKWRC
NICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLID
VSFSATKSGMLEVATQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVS
DLDDIFVPLPDDLLVNLSESRNVVEAFLDSLPLMFHDNVNVESAFGPALKAAYMVMNQLG
GKLLIFQNSLPSLGVGRLKLRGDDPRVYGTDKEYTLRVAEDTFYKQMAADCTKFQIGINV
YAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGDKLRHELARDLTRETAWESVMRIR
CGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLTLEETLLTTPTVYFQVALLYTAS
CGERRIRVHTAVAPVVTDLGEMYRQADTGSIVSVYSRLAIEKTLSSKLDDARNVIQQKIV
KALREYRNLNAVQHRLGSRLIYPESLKFLPLYGLAIGKSTPLQGGPADASLDERCAAGFT
MMALPVKKLLKLLYPSLFRVDEWLLKPSADLDDLKDVVRRLPLAAESLDSRGLYIYDDGF
RLVLWFGRMLSPDIAKNLLGSDFAAELSRVTLQEQENGMSKKLTRLIKKVRENDPSYHPM
CFLVRQGEQPREGFLLLRHLIEDQMGGSTSYVDWILQLHRQIQQNA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggagaatcggaattttccagctaggcctcctcctcctccgtcctcctcctct
ccattcgcatctgctccgccgccaggtgttccacctcaatccggtggaccagaggcggtt
ggctttagaccacctgcaaggcctttcacacctcctggtcctcctatggctccaccagcg
ggtgtgatgaggcctggccaacctcctttggtttctcagcttccagggagtagacctcca
ccgccatcgtttccttcaacagcttatggtcctcctggtggtggtggttcttttcagcgg
tttccagctcctcctcctccattcccggctacacaaaaccctcctcctagtgggccacca
ccacctcaaactcttgcaggtcacttatcgcctccattgtcttttcgcccacagcaacca
atgggacctcctccaccgagtatgacttctggattacctggagggtttgcttctccccct
ggtcctggttttcaacagtccatgcctggtggtccacagccatcttatcctggttattcc
agcaatcaggtcttacagggccctccaaagccgttccagtctccatctcagggtcctccg
tctgcagtctcatcgtaccctcctcagacaggaggttttgctcagcacccaggacagcag
aatatgcatccaagctatgcgcctcctcctaccagtaacgtccaaggcttggttgaagat
ttcaattcgctgtccctttcaaatattccggggtcgcttgagccaggacttgatcatacc
tcatttccaaggccattggatggcgacgtggagccgagttcgtttgctgaagcgcaccct
atgaattgccattctagatatctacggctgacaactagtgcgattccaaattcccagtct
ctggcgtcgaggtggcatttgcctctaggagctgttgtttgtccacttgctgaggctcct
gaaggggaggaagtaccactaattgattttggctcaagtggcatcatccgctgcagaaga
tgccgtacctatgtgaatccttatgttacttttacagattctggaagaaagtggcggtgt
aatatttgttctatgcttaatgatgtgcctggtgagtatttctcacatttagatgctact
ggccgaagaatggacatggatcaacgtcctgagctgacaaagggaagtgttgaaatcatt
gctccaacagaatacatggttcggcctccgatgccaccaatctacttcttcctcattgat
gtttcattttctgcaactaaaagtgggatgcttgaggttgctactcaaacgattaagtca
tgtttggataacctgcctggttatcccagaacacaaattggatttattacttatgacagc
actttacatttttacaacatgaagtcatctttgagccagccgcaaatgatggtcgtttct
gatctagatgatatatttgtcccattgccggatgatctccttgtcaatctatctgagtct
agaaatgtagtggaagcctttttggacagtctgcctctgatgtttcacgataatgtcaat
gtggaatcggcttttggtccagccctcaaagcggcgtacatggttatgaatcaacttggt
ggcaagttgctaattttccagaactcgttaccttctcttggtgttgggcggttaaagttg
cgcggagatgatcctcgtgtctatggaactgacaaagaatatactctaagagtagctgaa
gacaccttctataagcaaatggctgccgattgtaccaagtttcagataggaattaatgtt
tatgcgttcagtgataagtacactgatattgcctcattagggactctggcaaaatacact
ggaggacaggtgtactactatccaggcttccaatcgtctatccatggagataagttaaga
cacgagctggctagagaccttacaagggaaactgcgtgggaatccgttatgcgaataaga
tgtggaaaaggaattcgtttctcgtcctaccatgggaacttcatgctaaggtctactgac
ctgcttgctcttcctgctgttgactgtgacaaagcatacgcaatgcagctaactctggaa
gagacattgctaacaaccccgacggtgtatttccaagtcgctttactatacactgcttct
tgcggagagaggcgtataagggtacacacagctgttgcaccagtggttacagatcttgga
gagatgtatagacaagcagacaccggttccattgtctctgtatattctagattagcaatt
gagaaaactttatcctcaaaattggatgatgcacggaatgtcatacagcaaaagattgtt
aaagctctcagagagtatcgtaatcttaacgcggtgcagcatcggttggggtctagacta
atatacccagagtctctgaagttcttgccactttacggattggcaattggtaagtccact
cctcttcaaggtggacctgctgatgcttcacttgacgagcgctgtgcggcgggcttcacc
atgatggctctgcctgtcaaaaagctattgaagctgttatatcccagtttattccgtgtt
gatgagtggctcttaaagccatcagcggaccttgatgaccttaaggacgtagtaaggaga
ttgcctctggctgcagagagtttggattctagaggcctttacatatatgatgatggtttt
cgattggttttgtggtttggccgaatgctttcacctgacattgctaaaaatcttcttggg
tctgactttgcagcagagctctcaagggttacactgcaagagcaagagaatgggatgtcg
aagaagctaacgaggctgataaagaaagtgagggagaatgatccgtcatatcaccccatg
tgtttcctagtgaggcaaggagaacaaccccgagaaggcttccttcttctccgacatctc
attgaagaccagatgggcggttcgactagttatgttgattggattctgcaacttcaccgc
caaatccaacaaaatgcgtaa
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