Brassica napus (rape): 106420229
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Entry
106420229 CDS
T04128
Name
(RefSeq) DNA ligase 1-like
Organism
bna
Brassica napus (rape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
106420229
NCBI-ProteinID:
XP_013716539
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Position
A9:43389327..43393516
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AA seq
803 aa
AA seq
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MLAIRSSNHFRCISSLCTKTRFSSVLVSLNRQVSPFPSSSRLHHRAMSSSRPSAFDALMS
NARASAKKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDSPKPRSDSPSIAEDLKKG
AKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVA
CWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIA
PAHEGVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPL
TVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTV
LAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKT
CNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNA
ERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDI
KVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFL
DASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKR
TGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLN
PDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSE
QIADMYQAQKHNHPSNEGKGEDD
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgattcgatcatcgaatcacttccgatgcatttcttctctctgcactaaaact
cgattctcctccgtattagtctctctcaatcgccaagtttccccctttccctcctcctcg
cgcctccaccacagagcaatgtcttcttctcgcccctctgcattcgacgctctcatgtcc
aacgctcgcgcttccgccaagaagaaaacgactccccaagcttccaattcatctccctcc
ccgaacaaaagaaaaatctcgaaaacccaagacgccgattcgccaaaggcggaagctttt
tccgattcccccaaacccagatcagattcgccgtcaattgcggaagatttgaagaaggga
gcgaaaacccaagacgccgatttgacaaaggtggaggctttttccgattcggctaaaccc
agatcgtcaattgcgaaaaagtctaggactttgagtcagacggataaagtcgacgaattg
aagagtaggattgtgttgctgaagaggaagcctggcgaattcgatccggagagagtggcg
tgttgggagaaaggggagagagttccgtttctgtttgtggcattggcgtttgatttggta
tcagctgagagtggcaggattgtgattactgatattttgtgtaacatgttgaggactgtt
attgccaccactcctgatgatttggtcgctactgtttatcttgcggccaacgagattgct
cctgctcatgaaggggtggagttggggattggtgaaggttctattattaaggccatctct
gaagcttttggtagaactgagtcccaggttaagaagctgaatacggaactgggagacttg
gggcttgtagcaaaaggaagccgttcgtcacagactatgatgttcaagccagaaccattg
actgttgtcaaggttttcaatacttttcgacaaattgctaaggaaagtgggaaagatagt
acagagaagaagaaggatcggatgaaggcacttctcgtggcagctacagactgtgaacct
ctttacttaactcgtctacttcaggcaaagttgcggttaggcttctcaaatcagacggtc
ttagctgccttgggacaagcagctgtttataatgaagagcactcaaagccacccccaaaa
accaagtctcctttagaagaggctgcaaagatcgttaagcaagtattcactgtacttcct
gtgtatgacattatagttcctgctcttctaactggcggtgtgtggaatcttcctaaaact
tgtaacttcacacttggtgttcctattggaccaatgcttgcaaaaccaacaaaaggtgta
ggcgagatacttaacaagttccaggacacagttttcacatgcgaatacaaatatgatgga
gaacgtgcacaggtacattgtatggaggatggtacattcgagatatatagtcgtaatgct
gaaaggaacactgggaagtaccctgatgttgctcttgcgttatcaaggttaaagaagcct
tctgtgaaatcttttatcctggactgtgaggttgttgctttcgatagagagaaaaagaag
attcttccgtttcagattctgagcactcgagcgcgtaagaatgtgaacgtcaatgatatc
aaagttggcgtgtgcatctttgcttttgacatgttgtatctaaatggacagcaacttatc
caggagaatcttgatattcgccgagagaagctatacggatcatttgaggaagatcctgga
tatttccagtttgcaactgctctaacatccagcgatatcgatgaaatacaaaagtttctt
gacgcttctgttgacattgggtgtgaagggttaatcattaaaacaatgaattcagatgcg
acatatgagcctgcaaagcgatcgaataattggttaaaactgaagaaagactatatggac
agcattggggattctgtggatcttgtaccaattgctgctttccatggacgtggcaaacgc
acaggtgtctttggtgcattcttactagcttgctatgatgctgataaggaagagttccag
agcatttgtaaaataggtactggattttctgaagctgtgcttgaagaacggtctacgagt
cttcggtccagagtgattcctactcctaaacaatactaccgagttggagacagtctcaat
ccagatgtttggtttgagcccactgaggtctgggaagtgaaggcagctgacttgacaatt
agccctgtgcatcgtgcagccaatggaattgtggatcctgataagggaatttctctacgt
tttcctcgtttactccgtgtacgggaagacaagaagccagaggaagcaacatcatctgaa
cagattgctgatatgtaccaagctcaaaaacacaaccatccaagcaatgaaggcaaaggt
gaagatgattga
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