Brassica napus (rape): 106427759
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Entry
106427759 CDS
T04128
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106427759
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106427759
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106427759
03029 Mitochondrial biogenesis [BR:
bna03029
]
106427759
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106427759
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
ULK family [OT]
106427759
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
106427759
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106427759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ATG1-like_MIT2
Kdo
Pkinase_fungal
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
106427759
NCBI-ProteinID:
XP_013723931
LinkDB
All DBs
Position
C3:12348099..12352093
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AA seq
721 aa
AA seq
DB search
MSQSTARSGRVVGDYLVGRQIGSGSFSVVSEARHRVHGTHVAIKEIAMGRLNKKLQESLM
SEIYILRRINHPNIIRLIDMIESPGNVHLVLEYCRGGDLSVYIQSHGSVPEATAKHFMLQ
LAAGLQVLRDNNIIHRDLKPQNLLLSTDGNGANLKIADFGFARSLQPRRLAETLCGSPLY
MAPEIMQLQKYDAKADLWSVGAILFQLVTGTTPFTGNSQIQLLQNILRSTGLQFPADCRD
LSLDCIDLCQKLLRIDPVERLTFEEFFNHPFLSDRQSYDFSRSRLGSRTMDGFLSSGSSP
SRNMEESSQEDCLPFLLDDDSSGPEGSPSHLKRTSSMKSSSGFNIDARVEREEMESSPLN
YRINQGVDNNRFRNETHINSDRRNHGEPTRLTHSRPLIPKGRVDDSQDSMDQDFVLVSGP
PVDLPSSSSSSSKAYNFPFKSQSPPVELTNRSISSTAPMPIIGATGNNVGRFGSLDSQST
SHGSLDLGDAFEQPSTNSLTRITSLKKCAATIAELVHERIKSDKYLEAFSIQLAILAIWK
QALHICHTQAISGLEGSPGQDIYKPRESSSLKNEHITDLSHDGSEEISSQIQSQFIREIE
LAEELAKSIEPGNAMMPDAMETIFEAALDLGKLGGVKEVMGEIEKAGNQYSKAVRLMVFL
LVEAPMLILNPPLSLTNSDRYRLRKYIDILSRRLKHMQSHRRSSGSHMQGSSSSAMMNKQ
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccacggcgaggagcgggcgcgttgtcggcgactacttggttggtcggcaa
atcgggtcgggttcgttctctgtagtctccgaagcgaggcaccgtgttcacgggacccac
gtcgcaatcaaggagatcgctatggggaggcttaacaagaagctgcaggagagtctcatg
tctgagatttatatcctgaggaggatcaatcaccccaacatcatccgtttgatcgacatg
atcgagtcacctgggaatgtacatttggtgttggagtattgtagaggaggtgatttgtct
gtgtatattcagagtcatggaagtgttcctgaagctactgctaagcatttcatgttgcag
ttagccgctgggttacaagttcttcgtgacaataatattattcaccgtgatttaaagcct
cagaatcttcttctatccacagatggaaacggtgcaaatctgaagattgctgattttgga
tttgcaagatcgttgcaaccaaggagacttgcagaaacattatgcggttcaccattgtac
atggccccagagattatgcaacttcagaagtatgatgcaaaggcagatctctggagtgtt
ggtgctatcttatttcaacttgtgacaggcacaaccccttttacaggaaacagccagatt
cagttgctccaaaacattttgagatcaactggattacaatttccagcggactgtagagat
ttaagtttggactgtatagatctatgtcagaagttactgcgcattgatcctgtggaacgt
ttgacatttgaagagttctttaatcacccttttctttcggacaggcaatcatatgatttc
tcaaggagtagattgggctcaaggacaatggacggttttctttcttctggaagcagtccg
tcgagaaacatggaagaaagttctcaagaagactgtttacccttcctcctagatgatgat
tccagtggacctgaggggagcccttcacatttgaaaaggacctcctcgatgaagtcgtcc
tctggatttaacattgatgctagagttgagagagaggaaatggaatctagtcctttgaac
tatagaatcaaccagggagtggataacaatagatttagaaatgaaacacacataaattct
gataggagaaaccatggtgaacctacaagactgactcattcgagaccactcattcctaaa
ggaagagtagatgattctcaagactcaatggatcaagacttcgttctcgtatctggacca
ccagtggatttgccatcatcttcttcgagttcttcaaaggcttataatttcccattcaag
tctcagtctcctcctgtagagttaactaatagaagcataagttcaacggctcctatgcca
ataattggtgctactggcaacaacgttggccgttttggaagcctggacagtcagagcact
tctcatgggtcgctggatctcggggatgcttttgaacagccatcaactaacagcttgact
aggatcacttccctgaaaaaatgtgcagcaacaattgcagaactagttcatgaaaggatc
aaatctgacaaatacctagaagcattctcgatccagttggcgattctggcaatttggaaa
caggcactgcacatatgccatactcaggcaatctcaggtttggaaggaagcccaggccaa
gatatttacaaaccaagagaaagtagcagcctaaaaaacgagcatatcactgatctcagc
catgatggatctgaggagatatcctctcagattcagagtcagtttatccgggagattgag
cttgctgaagaacttgccaagagtatcgaacctggaaatgcaatgatgcctgatgcaatg
gagactatctttgaagcagcccttgatcttggaaaacttgggggagttaaggaggttatg
ggagagatagagaaggctggaaaccagtactcaaaagcggtgcgtttgatggtattcctt
ctagtggaagcaccaatgctgattctgaacccgccattgtctctcacaaactcagacaga
taccgtctcagaaaatatatagatatcctcagcagaagattaaaacatatgcagtcgcat
aggagaagctcaggctctcatatgcaaggatcatcatcatctgcaatgatgaacaaacaa
tcatag
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