Brassica napus (rape): 106430644
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Entry
106430644 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor protein kinase HPCA1-like
Organism
bna
Brassica napus (rape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_1
LRR_8
LRR_4
LRRNT_2
ABC1
Mid2
Pkinase_fungal
DUF3262
Motif
Other DBs
NCBI-GeneID:
106430644
NCBI-ProteinID:
XP_048598677
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Position
A10:5955637..5962207
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AA seq
953 aa
AA seq
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MSSRIGAFMLLILLCFQFLSVSALTNGFDASALQALKADWTKYPENWVGADPCGTNWVGI
TCTNDRVVSISLGNLDVEGKLSSDIASLTELQILDLSYNTELTGPLPSNIGQLKKLKNLI
LVACSFSGQIPESIGDLEQLIYLSLNLNQFSGRIPASIGRLSNLYWFDIADNQIEGTIPV
SNGTSSPGLDMLLETKHFHFGKNKLSGVIPETLFSSKMTLIHVLFDGNNFTGDIPDTLSL
VKTLTVLRLDRNKLTGNIPTSLNNLTNLQELYLANNEFTGSLPNLTSLTSLYTLDVSNNT
LEFSPIPSWISSLRSLATLRMEGINLNGSIPNSFFSPPQLQTVILKRNRINSALDFGTSY
SNQLEFVDLQYNDIDVYTQPSSNTRIQVILANNPVCQEQGNSPSYCSAIPHNTSYSTIPT
TCSPCDHGREASPSCRCAHPFTGTFNFRAPSFSGLFNSTNFEILQKDITGFFNKFSYPVD
SVAVRNIRENTTDHQLLIDLLVFPLGRESFNETGMLLVNFAFSNQTYKPPPIFGPYIFIA
DPYTQFSDGGGFKSSNMGVIIGAAVGCAVLLLLLTLAGVYALCQRKRADRATDQNNPFAK
WSTSKSSIDAPQLMGAKSFTFEELKKCTDNFSEANDVGGGGYGKVYRGILPSGQLIAIKR
AQQGSLQGGLEFKTEIELLSRVHHKNVVRLLGFCFDRSEQMLVYEYIPNGSLRDSLSGKS
GIRLDWIRRLRIALGSGKGLAYLHELADPPIIHRDIKSNNILLDENLTAKVADFGLSKLV
GDPEKTHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIEKGKYVVR
EVKMKMNKSRSLYDLQELLDTTIITSSSNLKGFEKYVDLALRCVEEEGVNRPSMGDVVKE
IENIMQLAGLNPNGDSASTSATYEDAIKGSGDPYGKDSFQYSGNFPASKLEPQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagaattggagcctttatgctcctgatcttgctttgcttccaatttttatcg
gtttctgctctcacaaatggttttgacgcttctgctttacaagccctgaaggctgattgg
acaaagtatcctgaaaattgggtaggtgctgatccttgtggaaccaattgggttggaatc
acatgtaccaatgaccgcgttgtttcaatatcactaggtaaccttgacgtggaaggaaag
ctttccagtgatattgcaagcttgactgaattgcagatcttggatttgtcttacaacact
gaattgactggaccacttccatcaaatatcggtcaacttaagaagttgaagaacttgatc
cttgtggcctgtagtttcagtggtcaaatccctgagtccattggagatcttgaacaactt
atatatctctccctgaatttaaatcaatttagtggaagaattccagcttccattggacgg
ttatcaaacctatattggtttgatatagctgacaatcagattgaaggaacgattccagtt
tctaatgggacttcttcacctggacttgatatgcttcttgaaactaagcattttcatttt
ggaaaaaacaagctttcgggagttatcccagaaacacttttcagctcaaaaatgactttg
atacatgtactattcgatgggaacaacttcacgggggacatcccagacacccttagcctc
gttaaaacgttgacagtgttacgccttgataggaataaacttactggcaatattcctaca
agtcttaataacctcacaaatcttcaagaactgtacttggccaacaacgaatttacaggt
agtcttccaaatttaaccagcttgaccagcctctacacattagatgtaagcaataacact
ttggaattctcacctataccatcatggatctcttcattacgctccttggcaacattaagg
atggaagggatcaaccttaatggttcaataccaaactcatttttcagccctcctcagttg
cagacagttatcctaaagaggaatcgaataaattcagcgttggactttggtaccagctat
agcaaccagttggagtttgttgatttgcaatacaatgacatagatgtttatacacaacca
tcctctaacacacgcatccaagtaatattggcaaataatccagtgtgccaggagcaggga
aacagtccaagttactgctcagcaatcccacacaatacctcttattctaccattccaaca
acctgttctccgtgtgatcatggcagggaagcgagtccttcgtgccgctgtgcgcatcca
ttcacaggaacattcaatttcagggctccttccttctcagggttattcaactccaccaac
ttcgaaattcttcagaaggatataactggtttcttcaataagttcagttatccagtggac
tccgtggccgtcagaaacataagagagaacacaacagatcatcagcttctaatcgatctt
ttagtctttccattgggcagagagagttttaatgagacgggaatgttacttgttaatttt
gcctttagcaaccagacttataagcctccccctatatttggcccttacattttcatagcc
gatccctacactcagttctctgatggaggaggttttaagtcatcaaacatgggcgtcata
atcggagcagcagttggttgcgcggttcttctgttgttgttaactctagctggagtttac
gctctctgccagaggaagagagcagacagagcaactgaccaaaataatccttttgccaag
tggagtacgagcaagagcagtattgatgctccgcagctaatgggagcaaaatcttttact
tttgaagagttgaagaaatgtacagacaacttttcagaggcaaatgatgttgggggtgga
ggttatggcaaggtttacagagggattcttccctcggggcaactcattgcaatcaaaaga
gctcaacaaggatctttgcaaggagggttggaattcaaaactgagatcgaactactttca
agggttcatcataaaaatgttgtcagactcttgggcttttgctttgatcgaagtgaacaa
atgcttgtatacgagtacattccaaatggctctcttagagacagtctctcagggaagagt
gggataagacttgattggataagaaggctcagaatagcacttggttcagggaagggtctg
gcttatcttcatgagcttgctgatcctccaattatacacagagacatcaaatcaaataat
atattacttgatgaaaatctaactgcaaaggttgccgattttggcctctccaaacttgtg
ggagaccctgagaaaactcatgtgacaacacaagtgaaaggaaccatgggctacttggat
cctgagtactacatgacaaatcagttgaccgagaagagtgatgtgtatgggtttggtgtg
gtgatgcttgagctattaaccggtaaaagtccaatagagaaaggtaaatacgtggtgaga
gaggtgaagatgaaaatgaataagtcgaggagtttgtatgacctgcaagaactgttggac
acgacgatcatcacaagcagcagcaaccttaaagggtttgagaagtacgtagatttggct
ctgagatgcgtggaggaggaaggagtgaatagaccatccatgggtgatgttgtgaaagag
attgagaacataatgcagctcgctgggttaaacccgaacggggattcagcatcgacttcg
gcaacgtacgaggatgcaatcaaaggatctggtgatccttatggcaaggactcgttccag
tacagtgggaatttcccagcttcaaagctcgaaccccagtga
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