Brassica napus (rape): 106446990
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Entry
106446990 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Organism
bna
Brassica napus (rape)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_1
LRR_4
LRR_8
APH
ABC1
Peptidase_M56
DUF2951
PIP49_C
ETRAMP
Kinase-like
CrgA
LRRNT_2
DUF6548
Motif
Other DBs
NCBI-GeneID:
106446990
NCBI-ProteinID:
XP_048634345
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Position
A4:16952714..16959679
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AA seq
638 aa
AA seq
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MIKMAAPTGNTNLFLRPLILSLLLLASPFVSSVEIDSSDLKALQVIKTELGVNGQRSSLS
SSDANPCGRGGVSCEIRHSDATGGYVLRVTRLVYRSRSLAGTISPVIGTLSELKELTLSN
NKLVGGVPLDVLNCKKLEVLDVRNNRFSGQIPGNFSGFIRLRILDLSSNKFSGNLNFLRN
LPNLESLSVANNIFSGKIPELVMSFHNLRFFDFSGNRLLESPVPVMSKIKISPYQTRHIL
AETPSTNSTKKPNNTTTTTKATVSPPKDKKKKKKKKKNKRKIVVAWILGFVVVGIGGIIS
GVIFRLILKARRGPEKPLSPTIFSLLIKRAEDLAFLENEESLASLKLIGRGGCREVFKAK
LPGSNGKIIAVKRVTQPCRSATELVDEEPRFLNRYMLQIRSEIITVGHIRHRNLLPLLAH
VPRPECHFLVYEYMKNGSLQDILTDVSAGNKELTWPARHKLALGIAAGLEYLHMESKPRI
IHRDLKPANVLLDDDMEARITDFGLARAMPDAVTHITTSTLSGTVGYIAPEYHQTLKFTD
KCDIYSFGVILGVLVIGKLPSDEFFQHTITNEMSLIKWMRKVLTSENPSLAIDPKLMKQG
FDEQMLLVLKIACYCTWDDPKRRPNSREVKIMLSQIKH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatggctgctcccaccggaaacaccaatctctttctccggcctctcatcctc
tcccttcttcttcttgcctcacctttcgtctcctccgtggagatcgattcctcagatctc
aaagctcttcaagtcatcaaaacagagctaggagtcaacggtcaacgctcttctctctct
tccagtgatgctaacccttgcggtcgcggaggagtttcctgcgagatacgccactccgac
gccaccggaggatacgttctccgcgtcacgaggctcgtataccgatcccggagcttggcc
ggaaccatctcaccggttatcggaacgttgtcggagctcaaagaactcactttgtctaat
aacaagctggtcggtggtgttccactggatgtcttaaactgcaagaaactcgaagtcctt
gatgtccgaaacaacagattttccggtcagattccgggaaacttctctggttttatccgt
cttcgaattcttgatctttcttcgaacaaattctccgggaatttgaacttcttgaggaat
ctacccaatctcgagagtctctccgttgcaaacaatatcttctcaggcaagattcccgag
ctagttatgtccttccataatctccggttctttgatttctccggaaaccggttattggaa
agtccggttccggttatgagtaaaatcaagatatctccataccaaacaagacacattctt
gctgaaactccatctacaaactcaacgaagaaacccaacaacaccaccaccacaacaaaa
gcgacagtgtcacctccaaaagacaagaaaaagaaaaagaaaaagaagaagaacaaaagg
aagatagtagttgcctggatcttagggttcgtcgtcgtaggcataggcggaatcatctcc
ggagtgatcttcagattgatcctcaaagcaagaagaggaccagaaaaaccattaagtcct
actatattcagccttttgatcaagagagccgaagacttagctttcttggagaacgaagaa
tcattagcctctcttaagctcatcggcagaggaggctgccgagaagttttcaaagccaaa
ctaccaggaagcaacgggaagatcatagccgttaagagagtgacacaaccctgtagaagc
gcaaccgagcttgtagacgaagagcccaggtttctgaacaggtacatgttgcaaatcagg
tcagagatcatcacagtaggtcatatccggcaccggaatcttctcccgttgctagcacac
gtcccgagacccgagtgtcacttccttgtctacgagtacatgaagaacgggagtttgcaa
gatatactaaccgacgtttcagctggaaacaaagagctaacgtggccagcaaggcacaag
cttgctttaggtatagctgcggggcttgagtatcttcacatggaaagtaaacctagaatc
atccacagagacttgaagccggctaatgttcttcttgacgacgatatggaggctagaatc
acggatttcgggttggccagggcgatgcctgatgcagtcacgcacattacaacctctacg
ctttcaggtaccgtgggatacatagcaccagagtatcaccaaactctcaagttcacggac
aagtgtgacatctatagctttggggtgattctcggggtgctggtgattgggaagcttcct
tctgatgagtttttccagcataccattaccaatgagatgagtcttataaagtggatgagg
aaggtactaacgtcggagaatccaagcctagctattgatccgaagctgatgaaacaaggg
ttcgatgaacagatgcttcttgttctgaagattgcttgttactgtacttgggatgatcct
aaacggagaccgaacagcagagaagtcaagattatgctgtcccagatcaagcactag
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