Brassica napus (rape): 106447587
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Entry
106447587 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106447587
03041 Spliceosome [BR:
bna03041
]
106447587
03036 Chromosome and associated proteins [BR:
bna03036
]
106447587
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106447587
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106447587
mRNA cycle factors
Common to processing body (P body) and stress granule
106447587
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106447587
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106447587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106447587
NCBI-ProteinID:
XP_048634692
LinkDB
All DBs
Position
A4:20585954..20588908
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AA seq
608 aa
AA seq
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MSASWADVADSENNTASGSTSQKPQQPSRPAYVPPHLRNKQPSSSDPVAAPSPANDRVGY
NGPPSASRWAPSGGSGGYRADAGRPRGTGGGWNNRSGGWDRREREVNPFENADAEPEPAF
TEQDNTGINFDAYEDIPIETSGDNVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHA
IPILLAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVVQRPRGSRTVYPLAVILSPTRE
LASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVS
MQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFL
ANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGMQSLTLVFVETKRGA
DSLENWLCINGFPATSIHGDRSQQEREVALKSFKSGRTPILVATDVAARGLDIPHVAHVV
NFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSMARSLSELMQEANQEVPAWLSRY
ASRSSFGGGKNKRSGGRFGGRDFRREGSYSRGGGGGGGYYGGGGGGGYGGGYGAPSGGYG
GETPSAWD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcatgggctgacgtggctgactcagagaacaacactgcctctgggtccact
agtcaaaaacctcaacaaccttcacgacctgcttatgttcctccacatctaaggaacaag
caaccatcttcttccgaccctgttgctgctccctcaccagctaatgatcgtgttggttac
aatggtccaccttctgcctctcgttgggctccctctggtggtagtggtggttacagggct
gatgcaggtcgtccacgaggaactggcggtggctggaacaacaggagtggagggtgggac
cgtagggagcgtgaagtcaacccctttgagaacgctgacgctgagcctgagcctgcgttt
actgagcaggacaacactgggattaactttgatgcttacgaagatatcccgattgagact
agtggggataacgtgcctcctgctgtcaacacgtttgcggagattgatctcggggaggct
ttgaatctgaacatcaggaggtgtaagtacgtgaagccgacgcctgtgcagaggcacgcg
atccctatattgcttgcggggagggatttgatggcttgtgctcagacggggtctgggaag
acggctgcgttttgttttccgataattagtgggattatgaaggatcagcatgtagtgcag
agacctcgtggttcgaggacagtgtatcctcttgcggttattctatcgccaacaagggag
ttggcaagtcagatacatgatgaggctaagaagttttcttaccaaactggtgtgaaggtg
gttgttgcttatggaggaacacctattaaccagcagctacgggaacttgagaggggagtt
gatattcttgtggcgactcctggtagactaaatgatttgctcgagagagctagagtctct
atgcagatgattagattcttagctcttgatgaggccgataggatgctggacatgggtttt
gagccacagattaggaagattgtcgaacaaatggacatgcctcctcgtggtgttagacag
acgcttttgtttagtgctacctttccaagagagattcagagactagcagctgacttccta
gcaaactatatattcctggctgtgggtagagtaggttcaagtactgacttaattgtccaa
agggttgagtttgtccttgactctgacaagagaagtcacctcatggaccttcttcatgct
cagagagagaatggcatgcaatccctgaccttagtctttgtggagacaaagaggggagcc
gactctctggaaaattggctgtgcatcaatggcttcccagcaacctccattcacggtgac
aggtcacagcaggaaagagaagtggcgctgaagtcattcaagagcgggagaacaccgatt
ctggttgcaacggacgtagcagcgcgtggtctcgacattcctcacgtggctcacgttgtg
aacttcgatctaccgaacgacattgatgactatgttcaccgtattggacgaacgggacgt
gctggcaaatcaggactagcgactgccttcttcaacgacggcaacacctcgatggctaga
tctctctctgaactgatgcaagaagctaaccaagaagtccctgcgtggctctcgcggtat
gcgtcgcgttcctcctttggtggtggtaagaacaagcggtctggtggtcggtttggtggc
cgtgactttagaagggaagggtcttacagtagaggtggtggtggtggtggtggttactat
ggtggtggaggaggaggaggctatggcggtggatatggagctccaagtggtggatatggt
ggagaaactccaagtgcgtgggactaa
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