Brassica napus (rape): 106451642
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Entry
106451642 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: 4-coumarate--CoA ligase 1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106451642
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106451642
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106451642
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106451642
NCBI-ProteinID:
XP_013749046
LinkDB
All DBs
AA seq
536 aa
AA seq
DB search
MAPQEDAMQKQSSNNNSDVIFXSKLPDIYIPNHLPLHDYIFQNISEFASKPCLINGPXGH
VYTYSDVHVASVASPPVFKKLGVNQNDVVMXLLSNCPEFVLSFLAAXFRGATATAANPFF
TPAEIAKQAKASNSKLIVTESRYVDKIKDLQNDGVIIVCTDEEPSPIPEGCLRFTELTQS
PXIETVEISSDDVVALPYSSGTTGLPKGVMLTHRGLVTSVAQQVDGDNPNLYFHSDDVIL
CVLPLFHIYALNSIMLCGLRVGASILIMPKFEINLLLELIXRCKVTVAPMVPDCLAMAKS
PETEKYDLSSIRVVKSGAAPLGKELEDAVSAKFPNAKLGQGYGMTEAGPVLAMSLGFAKE
PFPVKSGACGTVVRNAEMKIIDPDTGDSLSKNKPGEICIRGHQIMKGYLNNPAATAETID
KDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHQDITDVAVVAMK
EEAAGEVPVAFVVKSKDSELSEDDVKQFVAKQVVFTRESTKCSSLSPFLKLHQGRY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctccacaagaagacgccatgcagaaacagagcagcaacaacaacagtgacgtcata
ttcngatcaaagcttccggatatttacatccccaatcacctccctctccacgactacatc
ttccaaaacatctccgagttcgcctccaagccttgcctgatcaacggtcccnacggccac
gtgtacacttactccgacgtccatgtcgcctccgtcgcatcgccgccggttttcaaaaaa
ctcggcgttaaccaaaacgacgtcgtgatgnacctcctctcgaactgccccgagttcgtc
ctctctttcctcgccgccntcttccgcggcgcaaccgcaaccgccgccaacccgtttttc
actccggcggagattgccaagcaggccaaagcctcgaactcgaagctcatcgtcaccgag
tctcgctacgtcgacaaaatcaaagacctccaaaacgacggcgttataatcgtctgcacc
gacgaggaaccttctccgatcccggaaggctgcctccgattcaccgagttgactcagtca
ccgnaaatcgaaacggtggagatttcttccgacgacgtggtggcgcttccttactcctcc
ggcacgacgggtctacccaaaggagtgatgctgactcacaggggactagtcacgagcgtc
gctcagcaagtcgacggcgataatccgaatctttacttccacagcgatgacgtcatactc
tgtgtcttgcccttgttccatatctacgctttgaactcgatcatgctgtgtgggcttaga
gttggtgcctccatcttgatcatgcccaagttcgagattaatctgctcttggagctcata
ncaaggtgtaaagtgacggttgctccgatggttcccgattgtttggcgatggcgaagtcg
ccggagacggagaagtatgacttgagctcgattagggttgtgaagtctggtgctgctccg
cttggtaaggagcttgaagatgccgtaagtgccaagtttcctaacgccaaactcggtcag
ggatacggaatgacggaagcaggtccggtgctagcaatgtcgttagggttcgcgaaagag
ccgtttccagtgaagtcaggagcttgtggtacggtggttagaaacgccgagatgaaaatc
atcgatccagacaccggagactcactttccaaaaacaaacctggagagatttgcatccgt
ggtcaccagatcatgaaaggttacctcaacaacccggcggctacagcagagaccattgac
aaagacggctggcttcacaccggagatatcgggttgatcgatgacgacgacgagcttttc
attgtcgatcgtttgaaagagcttatcaagtacaaaggttttcaagtggctccggctgag
ctagaggctctcctcatcggtcatcaggatatcaccgacgtggccgttgtcgcaatgaag
gaagaggctgctggtgaagttcccgttgcgtttgttgtgaaatccaaggattcagagtta
tcggaagatgatgtgaaacaattcgtggcgaaacaggttgtgtttacaagagaatcaaca
aagtgttcttcgttgagtccattcctaaagctccatcagggaagatattga
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