Brassica napus (rape): 106452610
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Entry
106452610 CDS
T04128
Name
(RefSeq) leucine-rich repeat receptor protein kinase HPCA1-like
Organism
bna
Brassica napus (rape)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_1
LRR_8
LRR_4
LRRNT_2
ABC1
Pkinase_fungal
CCDC23
Motif
Other DBs
NCBI-GeneID:
106452610
NCBI-ProteinID:
XP_013750222
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Position
C9:14464978..14470389
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AA seq
938 aa
AA seq
DB search
MVLKMSSRIQVCMLLILTFCQICSVSALTNGLDASALQALKSEWTRFPENWKGSDPCGTN
WVGITCNNNNHVISISLGNLNLEGKLSADISSLAELQILDLTSNSKLSGSLPSNIGNLRK
LTTLNLMECGFSGEIPESIGSLEQLITLSLNSNKFSGTIPASIGRLSKLNWFDIADNQIE
GTIPVSNGTSSPGLDMLLETKHFHFGNNTLSGDIPEKLFSSNMTLIHVLFDGNQFTGKIP
NSLGLVKTLTVLRLDRNKLTGDIPSSLNNLTDLNELYLADNRLTGSLPNLTSLANLYTLD
VSNNQLTFSLIPSWISTLRSLSTLRMEGIQLEGPIPILLFAPTLLQTVVLKRNQLNATLD
FGTNYSKQLELVDLQNNEITNYKPEANKGIQVILADNPVCREAGNQQSDFCKEIQPSTDF
SVPQINCSPCGQGREPSPACRCVYPITGKLIFRSPSFSGFSNNTNFIMLHQGIADFFRDP
SYQVDSVAIRNFRETATGHQLLVDLLLFPLDKESFNQTEMNSAISAFSTHTYDPPEIFGP
YIFRADQYRPFSGGSISTNTGIVIGAVVGAVVLVMLLTIAGIYGLRQKKRAEKATGQNNP
FAKWNQSTSSVDAPQLTGAKAFTFEELRKCTDNFSEANDVGGGGYGKVYKGILPSGKLLA
IKRAQQGSSQGELEFKTEIELLSRVHHKNVVKLLGFCFDRSEQMLVYEYIPNGSLTDGLS
GKNGIRLDWTRRLKIALGSSKGLAYLHELADPPIIHRDIKSNNILLDENLNAKVADFGLS
KLVGDPEKNHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIVGGKY
VVKEVKAKMDKSRNLYDLQELVATTIIANSENLNGFEKYVDLALRCVDGEGVKRPSMGEV
VKEIENIMQLAGLNPYIDSATNSRTYQEASKGSGDPYG
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaagatgagttcaagaattcaagtctgcatgctcctgattttgactttttgc
caaatttgttctgtttcagcgctaacaaatggtttagacgcttctgctttacaagccttg
aagagtgaatggaccaggtttcctgagaattggaaaggctctgatccttgtggaaccaat
tgggttggaattacatgtaacaataacaaccacgttatttcaatatcattaggcaacctt
aacttggaaggaaagctttctgccgatatttcttcgttggctgaactgcagatcttggat
ttgacatctaattctaaattgtctggatcgcttccatcaaatattggtaacctcaggaag
ttgactaccttgaaccttatggaatgcggtttcagtggtgaaatccctgagtccatagga
tctctagaacaacttataactctatcccttaactcaaataaatttagtggaacaattcca
gcttccattggacgattatctaaactaaattggtttgatatagctgacaatcagatcgaa
ggaaccattccagtttctaatgggacttcttcaccaggactggacatgcttcttgaaact
aagcattttcactttggaaataacacgctttctggggatatcccagaaaagctcttctcc
tcaaacatgactttaatacatgtgctattcgatggaaaccagttcacaggcaaaatcccg
aacagcctcggcctcgttaaaacgttgacagtgttacgccttgataggaataaactaaca
ggagatattccttcaagtctaaataatctcacagatctgaatgaactgtacttggctgac
aacagacttacaggtagccttccaaatttaacaagcttggccaatctctacacattagat
gtgagcaataaccaattgacattctcactgattccatcatggatctctacattaaggtcc
ctgtcaacattaaggatggaagggatccaactcgaaggtccaataccaatcttgctcttt
gcccctactctattgcagactgttgtattaaagcgcaatcagttaaatgcaacattggat
tttggtaccaactatagcaaacaattagagcttgtggatttacaaaacaatgaaataact
aattataaaccagaagctaataaaggcatccaagtaatattggcagataatccagtgtgc
cgagaagcagggaatcaacagagtgacttctgcaaagaaatccaacctagtactgatttt
tctgttccacaaataaactgttcaccatgtggtcaaggcagggaaccgagtccagcgtgc
cgctgtgtgtatccaattacaggaaaactcatcttcaggtctccttccttctcaggtttt
tccaataacaccaacttcataatgctccatcaggggatagcagatttctttagggacccc
agttatcaagtggactccgtggccatcagaaactttagagagactgcaactggtcatcag
cttctagtagacctcttgttatttccattggacaaggagagctttaatcagacagaaatg
aatagtgctatttctgcgtttagcactcatacatatgaccctcctgaaatatttgggcct
tacattttcagagctgatcagtaccgtccgttttctggaggttccatttcaacaaacacg
ggcattgtcatcggagcagtagttggtgccgtggttcttgtaatgttgttaaccatagct
gggatttacggtcttaggcagaagaagagagcagagaaagccactggtcaaaataatcct
tttgccaaatggaatcagagtacaagcagtgtcgatgctccgcagctaacgggagcaaaa
gcatttacttttgaagagttgaggaaatgcacggacaacttctcagaggcaaatgatgtt
ggaggtggaggttatggcaaggtgtacaaaggtattcttccctctgggaaactcctagcc
atcaaaagagcgcaacaaggatcttctcaaggggagttggagtttaaaactgagattgag
cttctttcaagggtccatcataagaatgtcgtcaaactcttaggcttttgttttgatcga
agtgaacaaatgcttgtatacgagtacattccaaatggctctcttaccgacggtctatca
ggtaagaatggtattagacttgattggactagaaggctcaaaatagcacttgggtccagc
aagggtttggcttatcttcatgagcttgctgatccaccaattatacacagagacatcaaa
tcaaataatatactacttgatgaaaatttaaacgcaaaggttgccgactttggcctctca
aaacttgtgggagaccctgagaaaaatcatgtgacaacacaagtgaaaggaactatgggc
tatctggatcctgagtactacatgacgaatcaattgactgagaagagcgatgtgtatggg
tttggtgtggtgatgcttgagctattaactggtaaaagtccgatcgtgggcggcaaatac
gtggtgaaagaggtgaaggcaaagatggataaatcaaggaacttgtatgacctgcaagaa
ttggtggccacgactatcattgcaaacagtgaaaatctgaacgggtttgagaagtatgtg
gatcttgctttgagatgtgtggatggggaaggagtgaagagaccatccatgggtgaggtt
gtcaaagagattgagaacattatgcagcttgcgggattaaacccttatattgattcagcg
actaattcgagaacgtaccaggaagcaagcaaaggatctggtgatccttatggctag
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