Brassica napus (rape): 111198021
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Entry
111198021 CDS
T04128
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111198021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111198021
03036 Chromosome and associated proteins [BR:
bna03036
]
111198021
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111198021
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111198021
PBAF complex
111198021
GBAF(ncBAF) complex
111198021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
111198021
NCBI-ProteinID:
XP_022549265
LinkDB
All DBs
Position
A10:15900416..15902739
Genome browser
AA seq
538 aa
AA seq
DB search
MSANNNNPQKPQQGSAPSPFGGNPGMASASVPGNQGFTQPHMAPNFPAQFQFSQAQAMAH
AQAQAQSKAQAQFQAQMQAGMTMNQGQGSQGIGGVLGSSSPSMTPGSLNMKRFQQRPPMR
PPSGFPASNNTVSPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLEFESRV
DAALSRKKVDIQEALKNPPCTQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIVGRIL
EDGVDPDQPGFVQQANPSHPKFSSFFKKVIVNLDQRLYPENSAITWESARSPAPQEGFEI
KRKGNQEFAATIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIISAIWHYVKARKLQNPN
DPSFFNCDAALHKVFGEEKVKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAISACYDV
LVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFI
NALIESQSKDLKVVAGEASRNAEKERRADFFNQPWVEDAVIRYLNRKPAAGNEGPGTW
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaacaacaacaatccacagaagccgcaacaaggctctgcgccttcacccttc
ggcggtaaccctgggatggcctctgcatctgttcccggaaaccaaggctttactcagcct
cacatggcacccaactttccagctcagtttcaattctcacaagcccaggccatggcccat
gctcaagcccaagcccagtctaaagcccaagctcagttccaagctcagatgcaagcaggg
atgacgatgaaccaagggcaaggctcccaggggattggtggtgtgttgggttcgtcttct
ccttccatgactcctggaagcttgaacatgaagaggttccagcagaggccgccgatgcgg
cctccttctggtttccccgcgagtaacaacactgtctcccccatgagaacgatggagttg
actcctgctgcgaggaagaagaagatgaagcttcctgagaagtctttgcaggagcgggtg
gcggcaatcttgcctgagtctgcgttgtacacgcagcttcttgagtttgagtcaagggtt
gatgctgctttgagtaggaagaaagttgacatccaggaggctctgaagaaccctccttgc
acgcagaagacgcttaggatctatgtgttcaactcgtttgcgaaccagaacaacaccatc
cctgggaatccaaacgctgacccgccaacatggactcttaagattgtcggtaggatcttg
gaagatggggtggatccggaccagccaggttttgttcagcaagcgaacccatcgcatccc
aagttctcgtctttcttcaagaaggtaatagttaacctggaccagaggctgtatcctgag
aactcggcgatcacatgggagagtgctcgttcacctgctcctcaggaagggtttgagata
aagaggaaagggaatcaggagtttgcagctactattcggttggagatgaactacgtccct
gagaagttcaagctttctactgcattgatggatgttctcgggattgaggttgagacaaga
ccaagaatcatctctgcgatatggcattacgttaaggcgaggaagttacagaacccaaat
gatccttctttcttcaactgcgacgctgcgcttcacaaagtgtttggggaagagaaggtg
aagttcacaatggtgtctcagaagatatctcatcatttgtcacctccaccgccgattcat
ttagaacacaagatcaagctgtcgggaaacaacccggctatatcggcatgttacgatgtc
ctggtggatgtacctttcccgattcagagggatctgaacaacttgttggccaacgcggag
aagaataaagagattgaggcttgtgatgaagctatatgtgcagccataaggaaaatccat
gagcataggaggagacgtgcgtttttcttgggatttagtcagtcgccggttgagttcata
aacgcactgatcgaatctcagagcaaggatctgaaggttgtagcgggagaagctagtcga
aatgctgagaaagaacgtcgagcagacttcttcaatcaaccttgggttgaggatgcggta
atacgttacttgaaccggaagccagcagctgggaacgaaggaccagggacctggtga
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