Brassica napus (rape): 111212921
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Entry
111212921 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase-like 1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
111212921
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
111212921
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
111212921
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Motif
Pfam:
AMP-binding
AMP-binding_C
LysR_substrate
Motif
Other DBs
NCBI-GeneID:
111212921
NCBI-ProteinID:
XP_022570280
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Position
C9:10542617..10545666
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AA seq
543 aa
AA seq
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MEARKQDNEHIFRSLYPSVPIPDKLTLPEFVLQGVEEFTENVAFVEAVTGKSVTYGDVVR
DTKRLAKALTSLGLRKGQVMVVVLPNVAEYGIIALGIMSAGGVFSGANPTALVSEIKKQV
EASGASGIITDSTNFEKVKALGLPVIVLGEEKIEGAVNWKDLLEAGDRSGDNNREKILQT
DLCALPFSSGTTGLQKGVMLTHRNLIANLCSTLFSVRSEMIGQIVTLGLIPFFHIYGIVG
ICCATMKNKGKVVAMSRYDLRLFLNALITHEVLFAPIVPPIILNLVKNPIVDEFDLSKLK
LRSVMTAAAPLAPELLTAFEAKFPNVQVQEAYGLTEHSCITLTHGDPDKGQGIAKRNSVG
FILPNLEVKFIDPDTGRSLPKNTSGELCVRSQCVMQGYFENKEETEKTIDEEGWLHTGDV
GYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPVA
CVVMNPKAKEKEEDILSFVAANVAHYKKIRAVHFVDSIPKSLSGKIMRRLLRDNILSIKK
TLF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcgaaagcaagacaatgaacacattttccgcagtctatatccatctgtgccc
attcccgacaagcttacactgcctgagtttgtgctccaaggagtagaagaattcacagag
aatgtggcgttcgtagaagctgtgaccggtaaatccgtcacgtacggtgatgtagtgaga
gacacaaagaggctagccaaagcgttgacctcacttggactaaggaaaggtcaagtaatg
gttgtggttctaccaaatgtcgccgagtatgggattattgcccttggcattatgtccgcc
ggtggagttttctctggcgctaatccgacggctcttgtctccgagatcaagaagcaagtt
gaagcttctggtgctagtggaatcatcactgattctactaacttcgaaaaggtgaaggct
ttgggtttaccagtaatagtgttaggtgaagagaagatcgaaggagcagtgaactggaaa
gatcttctagaagcaggagacagatctggagataacaatagagagaagattcttcagaca
gatctatgtgcacttcctttctcttcaggcacaacaggattacaaaagggagtgatgctc
acacatcgcaacctaatagcaaatctttgctctactctcttcagcgtccggtctgaaatg
atcggccagatcgtgactcttggtttgattccgttctttcacatttacggtatcgttgga
atctgttgtgctacaatgaagaataaaggcaaagttgttgctatgagtcggtatgatcta
aggcttttcttgaatgctttgattactcatgaggtcttgtttgcgcctattgttccacct
attatattgaatcttgtcaagaatccgatcgtcgatgagtttgatctttctaagcttaaa
ctccgttctgttatgactgctgccgctcccttagcccccgagcttctcactgcctttgaa
gccaagtttcctaatgttcaagtccaagaggcttacggattaacggagcatagctgcatt
actttaactcacggtgatcctgataaaggacaaggaatcgcgaaacgaaactctgtcgga
tttatacttccgaatctcgaggtgaagttcatagatcctgacactggccggtcgcttccg
aagaacacttctggtgagctctgtgtgaggagccagtgtgtgatgcaaggttacttcgag
aacaaggaagagacggagaagacgatcgatgaagaaggttggcttcacactggagatgta
ggttacattgatgatgatggagacattttcatcgttgatcgcatcaaagaacttatcaaa
tacaagggctttcaggtggctccggcggagcttgaagctattctactcactcatccatca
gttgaagacgtagccgtcgtgccgttaccggacgaggaagcgggagagattccggtggct
tgtgttgtgatgaatccaaaagcgaaagagaaagaagaagacatccttagctttgttgcg
gcaaatgtggctcactacaagaagatcagagccgtccattttgtggattcaattcccaag
tctctctctggtaaaatcatgaggaggcttctcagagacaacatcctcagcatcaagaaa
acgctattctaa
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