Brassica napus (rape): 125600712
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Entry
125600712 CDS
T04128
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125600712
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125600712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125600712
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125600712
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
125600712
NCBI-ProteinID:
XP_048629258
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Position
A3:5718181..5720888
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AA seq
670 aa
AA seq
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MDERDQFHRNEAISAVADEGFMGEEEDDDFDDLYNDVNVGGGFLQSVRKNDEAGSRNEVK
EKVKIEEEEAEEVSIPGLVGESVAIKTEPESEVGGSGVIVASSGYGAQELKVSEVSNQIP
SGVVGGGIKVELEQAPNRENDVEASRGNNVSQGLLPPPPPPPTLGNNENLMRPVNGATPH
GPGIMGNGAAIHMPGVLTGGGGGGGTFLFVGDLHWWTTDAEVEAELCKYGAVKEVRFFDE
KASGKSKGYCQVEFYDPMAATACKEGMNGFEFNGRPCVVAFGNPHSIKRMGEAQVNRNQQ
AQAALAQAKRGGPGPADPPPPINKPVVAPTNNNFNSHAVGGNFQGEENRGFGRGNWGRGN
GQGRGPGGQMRNRPGGMGGRGFMGNGGGGFGPMNMMHPQSMGFEQAFGGPMARMGGYGGF
PGAPGPPFPGILPSFPPVGGVGLPGVAPHVNPAFFGRGMPMGMMPNAGVDMGMWDPNSGG
WGGGGEDLGGGRAAESSYGEEAASEHQYGEVNHDNRGARQNHVKEKERASEREWSGSSDR
RNREDNDAGYERDMPREKDGGHGYDLPERRHRDDRETGREREREHHHKERERSRDRDRER
DRERDRHREERERYGADHRSKHRDEPEHEDEWNRGRSSRGHSKSRLSREDNHRSRSRDAD
YGKRRRLTTE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagagatcagttccatcgcaacgaggcgatctctgccgtcgccgacgagggt
tttatgggtgaggaagaagacgacgactttgatgatctttataacgacgttaacgtcgga
ggagggtttcttcagtctgtgagaaagaacgacgaagcgggatcaagaaacgaggtgaag
gagaaggtcaaaatcgaggaagaagaagctgaggaggtctcgatacctggtttggttggt
gagagcgttgctatcaaaacagaaccagaatcagaagtaggaggtagtggtgtgatagtc
gcttctagtggatatggagctcaagagcttaaggtaagcgaggttagcaatcagattcct
agtggagttgtaggaggtgggattaaagttgagctagagcaagctcctaatagggaaaat
gatgttgaagcttctagaggaaataacgtttctcagggtctcttgccgccgccaccacct
cctcccaccttgggaaataacgagaatttgatgagacctgttaatggtgcgactcctcat
ggacctggcattatggggaatggagctgctatccatatgcctggtgttcttactggtggt
ggtggaggagggggaacttttctttttgttggggatctgcattggtggacaacagatgct
gaagttgaagcagagctctgcaagtatggtgcggtgaaggaggttaggttcttcgatgag
aaagctagtggtaagtcgaaagggtattgtcaggtggagttttatgatcctatggcagct
acagcttgcaaagaggggatgaatgggtttgaattcaacggtaggccctgtgttgttgcc
tttggtaatccgcattccattaagagaatgggggaggcgcaggtgaataggaaccaacag
gcgcaagctgcacttgcacaagctaagagaggtggcccaggccctgctgatcctcctcct
ccgattaataaacccgtcgtggcccccaccaacaataacttcaacagccacgccgttggc
gggaatttccaaggtgaggagaatagaggatttgggagaggtaattggggaagaggaaac
ggacaaggtagaggaccaggtggtcagatgaggaataggcctggtgggatgggtggaaga
ggtttcatgggtaatggtggaggtgggtttggtcctatgaatatgatgcatcctcaatca
atgggatttgaacaagcttttggtggacccatggcgagaatgggaggctatggaggcttc
cctggggctccaggtccaccgtttcctgggattttgccctcgttccctcctgtaggagga
gttggtttacctggagtggcacctcacgtgaatccagcgttttttggaagagggatgccg
atgggaatgatgcctaatgctggtgttgatatgggaatgtgggatcctaatagtggagga
tggggtggtggtggtgaggatttgggtggtggaagagctgcggaatcgagttatggggag
gaagctgcatcggagcatcagtacggagaggttaatcacgataatagaggggctcgtcag
aatcatgtgaaggaaaaagagagagcttcggaaagggaatggtctggttcatctgataga
aggaatcgtgaggataatgatgctggttatgaaagggacatgccgagggagaaagatggt
ggtcatggctatgatttgccagagagaaggcatcgtgatgatagagagaccggccgtgag
cgtgagagggaacatcatcataaggagcgtgagcgttccagggatcgtgacagagaaagg
gacagggagagggatcgtcatagagaagaacgagaaagatatggtgctgatcatcgtagt
aaacacagggacgaacctgagcatgaggatgagtggaacagaggtcgatcgtctagagga
cacagcaaatcacgtctgtctcgggaggataaccatcgttcaagatcaagggatgctgat
tatgggaaaagaaggcggcttacaactgaataa
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