Brassica napus (rape): 125603081
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Entry
125603081 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase 4-like isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
125603081
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
125603081
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
125603081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125603081
NCBI-ProteinID:
XP_048630301
LinkDB
All DBs
AA seq
553 aa
AA seq
DB search
MAFRQQEALSLTKKTDQDFIFRSKLPDISIPNHLPLTEYVFQKFSGDGDGDSTTTCLIDS
ATGRTFTYADVQITLQRIAAGLHRLGIRHGDTVMLLLPNSPEFALSFLAVVHLGAVSTSA
NPLFTQTEIAKQAKASAAKMIITKSCYVHKLTNLRQLGVVIVCVDDKNDVVSLADGCVRF
TDLTQADEAELPKPEISPEDTVSIPYSSGTTGLPKGVMISHKGLVTSIAQKVDGENPNLN
FTRDDVIICFLPMFHTFTHSSLMLSAMRTGAAFLILPRFELNLVMKMVQKYKVTVVPMAP
PVVLAFVKSPETEKYDLSSVRMMLSGSATLKKELEDAVRRKLPNAIFGQSYGMTEAGTVA
NSLAFAKHPFKTKSGSCGTVIRNAEMKVVDTITGASLPRNKSGEICIRGHQLMKGYLNDP
EATARTIDKYGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLIFHPYIE
DAAVVAMKDEVADEVPVAFVVRSKGSQLTEDDIKNYVNKQVVHYKRIKMVFFVKAIPKSA
SGKLLRKVLRAKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccgacaacaagaagcactttctcttacaaaaaagacagatcaagatttcatt
ttccggtccaaacttcccgatatctccattccaaaccaccttcctctcaccgagtacgtc
ttccagaagttctccggcgacggagacggcgactccaccaccacatgcctcatagacagt
gccaccggacgtaccttcacctacgccgacgtgcagatcactttacagcggatcgctgcc
ggactccacaggctagggatccgccacggtgacaccgtgatgctccttctcccaaactcg
ccggagtttgctctatctttcctcgccgtggttcacctcggagccgtatcgacctccgct
aatccgctatttacccaaacggagattgcaaaacaggcaaaagcctccgccgcgaagatg
atcatcacaaaatcatgttacgtccataaactaacaaaccttagacagcttggtgttgtc
atagtttgtgtagacgacaaaaatgacgtcgtttcgttagctgacggttgcgtgaggttc
acggacctgactcaagcggacgaggcagagcttcctaagcctgagatctcgccggaggat
acggtgtcgattccgtactcctccgggaccacgggacttccaaaaggtgtgatgattagt
cacaagggattagttacgagcattgctcagaaagtagacggagaaaaccctaatctcaac
ttcaccagagatgacgtcatcatctgtttcctcccaatgtttcacactttcacgcacagc
tcgttgatgctttcggcgatgaggaccggtgccgcgttcttgatcttgccgaggttcgag
ttgaatctggtgatgaagatggttcaaaagtataaggtcacggtggttccgatggcccca
ccggtggttctagcgttcgttaagtctccggagacagagaagtacgatctgagctcggtg
aggatgatgctttcgggctcagctacgctcaagaaggagcttgaagacgccgtgcgtcgt
aagcttcccaatgcaatatttggtcagagttatggaatgacggaagcaggaacagtagct
aattcgttggcatttgcaaagcacccgtttaaaaccaagtctggttcgtgtgggactgtg
atcagaaacgctgagatgaaagtggtcgataccattaccggagcctccttaccacgcaac
aaatctggcgaaatctgtattagaggccatcaactcatgaaaggttatttgaatgatccg
gaggctactgctcgaacgattgataaatacggatggttacacacaggagatattggtttt
gtagatgatgacgacgaaattttcattgttgatcgtttgaaagaactcatcaaattcaaa
ggatatcaagtggctccagctgagcttgaagcattgcttatttttcatccttatatcgaa
gatgctgctgttgtcgcaatgaaggatgaagtagctgatgaggttccggtagcgtttgtg
gttagatcgaaaggatctcaattaaccgaagatgatatcaagaattatgtcaacaaacag
gtggttcactacaagagaatcaagatggtgtttttcgtaaaagctatacccaaatcagca
tctggaaagcttttgagaaaggttctccgagctaaattgtaa
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