Brassica napus (rape): 125608797
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Entry
125608797 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase 4-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
125608797
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
125608797
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
125608797
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Motif
Pfam:
AMP-binding
AMP-binding_C
Peripla_BP_1
Motif
Other DBs
NCBI-GeneID:
125608797
NCBI-ProteinID:
XP_048635258
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Position
A5:20255933..20263072
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AA seq
559 aa
AA seq
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MALLQQQETLSLAKNQEPSQDFIFRSKLPDISIPNHLPLTDYLFQKFSGDGGGDSTATCL
IDGGTGRIFTYADVQITLRSIAAGLYRLGIRHGDTVMLLLPNSPEFAHSFLAAAYLGAIS
TPANPLFTQPEIAKQAQASGAKMIITKPCYVDKLKNLENVLIVCVPDDVPLPDGCVSFTE
LTQADETELPKPEISPEDTVLMPYSSGTTGLPKGVMITHKGVVTSTAQKVDGENPHLNFT
GDDVIICFLPMFHTYAHNSLMLSAMRAGAAFLILPRFELNKVMEMIQKYKVTVVPMAPPV
VLAFVKSPDTETYDLSSVRMMFSGSGALAKELEDAVRLKLPNAIFGQSYGMTEMGTVAKS
LAFAKNPFKIKSGSCGTVIRNAEMKVVDTITGLSLPHNKPGEICIRGDQLMKGYLNDPQA
TAQTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLISHPFIEDV
AVVAMKDEIAGEVPVVFVVRSEGSQLTEDDVTSYINKQVVHYKRIKMVFFTDCIPKAPSG
KILRKDLRARLANGLMNKS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctacaacaacaagaaacactttctctagcaaagaatcaagaaccatctcaa
gatttcattttccgatccaaacttcctgatatctccatccctaaccaccttcctctcacc
gattacctcttccagaaattctccggcgacggaggcggcgattccaccgccacatgtctc
atcgacggtggcacaggacgtatcttcacctacgccgacgtacaaatcactttaaggagt
atcgctgcaggactctaccggctcgggatccgccatggtgacactgtcatgctccttctc
ccaaactcgccggagtttgctcactctttcctcgctgcagcttacctcggggccatatct
acgcccgcgaatccgttattcacccaaccggagatcgcaaaacaggcacaagcctccggc
gcgaagatgatcattacaaagccatgttacgtcgataagctaaaaaaccttgaaaacgtt
ttgattgtttgcgtacccgacgacgttccgttacctgacggttgcgtaagtttcacggaa
ctgacgcaagctgacgagacagagcttcctaaaccggagatctcaccggaggatacggtg
ttaatgccgtactcctccgggaccacgggacttccaaagggagtcatgattactcacaag
ggagtagttacgagtactgctcagaaagtcgacggagaaaaccctcatctcaacttcacc
ggagatgacgtcatcatatgttttctcccaatgttccacacttacgcgcacaactcactg
atgctttcggcgatgagggccggtgcggcgttcttgattctgcctaggttcgagttgaat
aaggtgatggagatgattcagaagtataaggtcacagtggttccgatggccccaccggtg
gttctagcgttcgttaagtctccggatacggagacgtacgacctgagctcggtgagaatg
atgttttcaggctcaggtgcattggcgaaggagcttgaagatgcagtgcgtctcaagctt
cccaatgccatatttggtcagagttatggaatgactgaaatgggaacagtggctaagtcg
ttggcatttgcaaagaacccgtttaaaatcaagtctggttcgtgtgggactgtgatcagg
aacgccgagatgaaagtggtcgataccattactggactctccttaccacacaacaagcca
ggcgaaatctgcatccgaggcgatcaacttatgaagggttatttgaatgatccgcaagct
actgcacaaaccatagataaagacgggtggctacacacaggagatattgggtttgtggat
gacgatgatgagatcttcattgttgatcgtttgaaggaactaatcaaattcaaaggctat
caagtggctccagctgagcttgaagcattgcttatttctcatccttttattgaggatgtt
gctgttgtcgcaatgaaggatgaaatagctggtgaggttccggtagtgtttgtggttaga
tcagaagggtcacagctaactgaagatgatgtcacgagttatatcaacaaacaggtggtt
cactacaagcgcattaagatggtgttcttcactgactgcattcctaaagctccatccggg
aaaatattgaggaaagatctaagggcaagattagctaatggattgatgaacaaaagttaa
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