Brenneria nigrifluens: EH206_07825
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Entry
EH206_07825 CDS
T06070
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH206_07825 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bng03019
]
EH206_07825 (rhlE)
Enzymes [BR:
bng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH206_07825 (rhlE)
Messenger RNA biogenesis [BR:
bng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH206_07825 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QCR04093
LinkDB
All DBs
Position
1702094..1703461
Genome browser
AA seq
455 aa
AA seq
DB search
MSFDSLGLSADILRAVEEQGYREPTPVQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QLLSSGAPPAKGRRPVRALILTPTRELAAQIDENVQAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSQIEILVLDEADRMLDMGFIHDIRRVLAKLPVK
RQNLLFSATFSDEIRTLANKLLTNPASVEVVRRNAPSELVTQHVHFVDKRRKRELLSQLI
GENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGGIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDI
ERLLKREIPRIAVSGYEPDPSIKAEPIINGRQGGRGGAPRGQTGAPRGQSERQRADGPRQ
PRRSGGNGASAWAGNGDGQQRRAPRPQNRGKPAAK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagcgccgatatcctgcgtgccgttgaagaacagggc
tatcgtgaaccgacgccggtacagcgccaggcgattcccgtggtgctggccggccgcgac
ctgatggccagcgcgcaaaccggcaccggcaaaaccgccggctttaccttgcctttgctg
caactgctgagcagcggcgcgccgccggcgaaaggccgtcgtccggttcgggcgctgatc
ctgacgccaacccgcgaactggcggcgcagatcgatgaaaacgtgcaggcatacagcaaa
tacctgcgtttgcgctctctggtggtgtttggcggcgtcagcatcaacccgcagatgatg
aagctgcgcggcggcgtcgatattctggtcgccacgccgggccgtttgctcgatctggaa
catcagaatgcggtcgatctgtcgcagattgaaattctggtgctggatgaagcggaccgt
atgctggatatgggctttattcacgatatccgccgcgtattggcgaaactgccggttaaa
cgtcagaatctgctgttctccgccaccttctcggatgaaatcaggacgctggcgaacaag
ctgttgaccaaccccgcgtcggttgaagtggtgcgccgcaatgcgccgtcggagctggtc
acccagcatgtgcattttgtcgacaagcgccgcaagcgggaattgctatcccagttgatc
ggtgaaaataactggcagcaggtgctggtatttacccgcaccaagcacggcgctaatcac
ctggccgagctgctggagaaagacggcatcaccgccgccgccattcacggcaacaaaagc
cagggcgcgcgtacccgggcgctggccaacttcaaggacggcggcattcgcgtgctggtg
gcgacggatatcgccgcccgcggtctggatatcgatcaactgccgcacgtggtgaactat
gaactgcccaacgtgccggaagattacgtccaccgcatcggccgcaccggccgcgcggag
tccaccggggaggccctgtcgctggtctgcgtggacgaacacaagctgctgcgcgacatt
gagcgtttgcttaagcgcgagatcccgcgcattgccgtgtcgggctatgagccggatccg
tcgatcaaggccgagccgattatcaacggtcgccagggcggacgcggcggtgcgcctcgc
ggtcagaccggtgcgccgcgcggtcaatccgagcgccagcgcgccgacggcccccgtcag
ccgcgcaggtccggcggcaacggcgccagcgcgtgggcaggcaacggagatggacagcag
cgccgcgcgccgcgtccgcaaaatcgcggcaaaccggcggcgaaataa
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