Bacillus nitratireducens: GSN03_21790
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Entry
GSN03_21790 CDS
T07605
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSN03_21790 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_21790 (mutM)
Enzymes [BR:
bnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GSN03_21790 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GSN03_21790 (mutM)
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSN03_21790 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QUG85960
LinkDB
All DBs
Position
complement(4279809..4280639)
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AA seq
276 aa
AA seq
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MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREAASLTEEEIERVYEAIVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggttgaaaacgttagacggacgcttgaaaatcttgtaacagga
aaaacgattgaagatgtcgttattacttatccaaaaatagtaaaacgaccggatgatgca
gaaatctttaaagaaatgctaagaggcgagacaattgaaaatataaagcgaagaggaaag
tttttgcttttatatgtaacgaattatgtcattgtttcacatttgcgtatggaaggtaag
tttttacttcatcaagaggatgagccaattgataaacatacgcacgtccgtttcttattt
acagatggaactgaattacattataaagatgtgagaaagtttggtacgatgcatctcttt
aagaaaggtgaagagttgaatcaaatgcctcttgctgacttaggcccggagccatttgat
gctgaattgacaccgcagtatttacaagaaagattgcaaaaaacaaatcgtaaaataaaa
gttgtattattagatcagcgtcttttagtggggcttggaaatatatatgtagatgaagtg
ttattccgttctcaaattcacccagaacgagaagctgcgtctttaacagaagaagaaata
gaaagagtgtacgaagcaattgttacaacgctaggcgaagcagtaaagcgaggcggcagt
acaattagaacgtatatcaattcgcaagggcaaattggttcattccaagaacttctaaat
gtatacggaaaaaaaggagaaccatgtgtgacttgtggtacgatcttagaaaaaacagtt
gttggcggccggggaacacattactgcccaatttgtcagcctagaatatag
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