Bacteroides ovatus: Bovatus_02673
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Entry
Bovatus_02673 CDS
T04113
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
boa
Bacteroides ovatus
Pathway
boa02020
Two-component system
boa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
boa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bovatus_02673 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bovatus_02673 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boa03021
]
Bovatus_02673 (rpoN)
Transcription machinery [BR:
boa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bovatus_02673 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
LacI
Motif
Other DBs
NCBI-ProteinID:
ALJ47298
UniProt:
A0A139L3R8
LinkDB
All DBs
Position
complement(3291503..3292990)
Genome browser
AA seq
495 aa
AA seq
DB search
MAQGSRQIQSQAQQQVQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEENAT
DNEYSDTENAEDGMDSDANDYDSLSDYLTEDDIPDYKLQENNRSKDEQAEDIPFSDSTSF
YEILKEQLRERNLTEHQCDLVEYLIGSLDDDGLLRKSLESICDELAIYAGIESTEEELEE
ALNILQDFDPAGIGARSLQECLLIQIRRKKEEEKTPSPILNLEERIIRECYEEFTRKHWE
KIIKKLDIDEETFQETITEITKLNPRPGASLGEAIGRNLQQIVPDFIVETYDDGTINVSL
NNRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVRQRQNTL
MVTMQAIIDLQRPFFLEGDESLLKPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYPL
KYFFSDGYTTEDGEEMSVREIRKILKECIEGEDKKKPLTDDELADILKEKGYPIARRTVA
KYRQQLNIPVARLRK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgtcaaatacaatctcaggcgcaacagcaggtacagacgctctcg
ccccagcagattctggtcgtgaaactgttggagcttcccgcagtagagttggaagaccgt
atccatgctgaactgcttgaaaatccggcacttgaagaaggtaaagaagagaatgctacg
gataatgaatattccgataccgagaatgcagaggatggcatggatagcgatgccaatgac
tatgattctttgagtgactatctgacagaagacgatattcccgattataaattgcaagag
aacaaccgttcgaaagatgaacaagcggaggatattccattttccgactccacctctttt
tatgaaatcctgaaagaacagttgcgtgaacgcaacctgacagagcaccagtgtgacttg
gtggaatacctgatcggttcattggatgatgacggattgcttcgcaaatctttggaaagt
atctgcgacgaactggcgatttatgccggtatcgaatcgaccgaagaagaactggaagaa
gcattgaacatcttacaggacttcgatccggcaggtatcggtgcgcgtagtcttcaggaa
tgtctgttgatacagattcgccggaaaaaagaagaagagaaaactcccagtcctatcttg
aatctggaagaaaggattatcagagaatgttacgaagaattcacccgtaaacattgggag
aagattataaagaaactggatattgatgaagagactttccaggaaaccattactgaaata
accaaactgaatccacgtccgggtgcttctttaggagaagcaattggcagaaatctccaa
caaatagttcctgactttattgtggaaacgtatgatgacggaaccatcaatgtaagtctc
aataaccgcaatgttcccgaactccgtatgagtcgtgacttcacggaaatggtggaggag
catacaaaaaacagggctaaccagtctaaggaatctaaagaagcgatgatgtttctgaaa
cagaaaatggatgcggcacaaggatttatcgatgctgtccgtcagcgtcagaataccttg
atggttaccatgcaggcgattatcgacctgcaacgtcctttcttcttggaaggagatgaa
tcgctattgaaaccgatgattctgaaagacgtggcggaacgtacgggattggatatttcg
acaatctcccgtgtgagtaacagtaaatatgtacagacgaattacggtatctatccgctc
aaatactttttcagtgacggatataccacagaagatggcgaagagatgtctgtccgtgag
attcgtaagatcctgaaagagtgtattgaaggcgaggacaagaagaaacccctgaccgat
gatgaattggcggatatattaaaggagaaaggttatcccattgcccgcaggacagtagcc
aaataccgtcaacaactgaatattcccgtggcgagactgcggaaataa
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