Bacteroides ovatus: Bovatus_04421
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Entry
Bovatus_04421 CDS
T04113
Symbol
yesX_2
Name
(GenBank) Rhamnogalacturonan exolyase YesX
Organism
boa
Bacteroides ovatus
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ALJ49014
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Position
5744862..5746703
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AA seq
613 aa
AA seq
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MKCITLFFSFCLIAIFSIAQPNYDFSKLKRERLGRGVIAIRENPSTVAVSWRYLSSDPMN
ESFDIYRNDEKINKHPLKDATFFQDAYAGTESVLYTVKAREGKTESSYQLPANAPLGYLN
IPLNRPEDGTTPSGQNYFYAPNDASIGDVDGDGEYEIILKWDPSNAHDNSHDGYTGEVYV
DCYKLSGKLLWRINLGRNIRAGAHYTQFMVFDFDGDGKAEVVMKTADGTVDGTGKVIGDA
QADYRNEQGRILTGPEYLTVFNGLTGEAMQTIDYVPVRGDLMGWGDSRGNRSDRFLACVA
YLDGIHPSVVMCRGYYTRTVLAAFDWDGKELKQRWVFDSNNPGCKDYAGQGNHNLRVGDV
DGDGCDEIIYGSCAIDHNGKGLYTTKMGHGDAIHLTHFDPSRKGLQVWDCHENKRDGSTY
RDAATGEVLFQIKDNTDVGRCMAADIDPTQPGVEMWSVASGGIRNVKGEVVKDRVRGLSC
NMAVWWDGDLLRELLDRNMVSKYNWEKGVCERIAIFEGTLSNNGTKANPCLQGDIVGDWR
EEILMRTADNTALRLYVSTIPTDYRFHTFLEDPIYRISIATQNVAYNQPTQPGFYFGPEL
QGTVFRGCKIPKK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcataactcttttttttagtttctgcctgatagctatcttctcgatagcccag
ccaaactatgacttttcgaagttgaaacgcgaacgtctgggacgtggtgtaattgctatc
cgagagaatccgtctactgtggctgtttcctggcgttatttgtcttccgacccgatgaat
gaatcttttgatatttataggaacgatgaaaagataaacaaacacccgttgaaggatgcc
actttctttcaggatgcctatgcagggacagaatctgtactttataccgtgaaagcaagg
gaaggtaaaacggaaagtagctatcaattaccggcaaatgccccattgggttatctgaat
attccgttgaaccgccccgaagatggtacgactccgtcagggcaaaactatttttatgct
ccgaatgatgccagtatcggtgacgtggacggtgatggcgaatatgagattattctgaaa
tgggacccgagtaatgcacatgataattcacatgacggctatacgggagaagtatatgtt
gattgctataagttgagcggaaaactattatggcgtattaatctgggacgtaacatacgt
gccggtgcacactacacccagtttatggtgttcgatttcgatggtgacggcaaagcggaa
gtagtgatgaagaccgcggacggaacggtggatggaacaggaaaagtgattggggatgcg
caggctgactatcggaatgaacaaggacgtatcctgaccggaccggaatatctgacagtt
tttaacggattgacaggagaagcgatgcaaacaattgattatgtgcccgtaagaggagac
ttgatgggttggggagacagtcgtggtaatcgcagcgaccgttttctggcctgcgttgcc
tatctcgacggcatacacccaagcgtagtgatgtgtcgtggatattatacacgtactgtt
ttggctgcttttgactgggatggaaaggagctgaaacaacgttgggtattcgacagtaat
aatcccggttgtaaagattatgccggacaaggaaaccataacctgcgggtaggtgacgtg
gacggtgacggatgcgatgagatcatctacggttcatgcgccatagaccataacggtaaa
ggactctacaccacgaaaatgggacacggcgatgccattcatctgactcatttcgacccc
tctcgtaaagggctgcaagtatgggattgtcatgaaaataaacgtgatggttctacctat
cgggatgcagctaccggagaagttctatttcagattaaagacaatacagatgtagggcgt
tgtatggcagctgatattgacccgactcaaccgggcgttgaaatgtggtctgttgcttcc
ggaggaataaggaatgtgaaaggagaggtggtaaaagaccgggtaagaggtttatcctgt
aatatggctgtttggtgggatggagatttgttgcgtgaattgttggatagaaatatggtc
agcaaatataattgggaaaaaggagtgtgtgagcgcatagccatttttgagggaactctt
tccaataatggaaccaaagcgaatccttgccttcagggagatatcgtaggtgactggcgc
gaagaaatactgatgcgtacagctgataatacagctttacggctttacgtctccactatt
cctaccgactatcgttttcatactttcctcgaagatccgatttatcgtataagtatcgct
acccagaatgtggcttataatcagcctacacagcccggattctatttcggaccggagctt
cagggcactgtattcagaggatgtaaaatacctaaaaaatag
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