Bactrocera oleae (olive fruit fly): 106627316
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Entry
106627316 CDS
T07646
Name
(RefSeq) maternal effect protein staufen isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
bod
Bactrocera oleae (olive fruit fly)
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bod01009
]
106627316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bod03019
]
106627316
Protein phosphatases and associated proteins [BR:
bod01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106627316
Messenger RNA biogenesis [BR:
bod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106627316
mRNA cycle factors
Stress granule specific factors
106627316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106627316
NCBI-ProteinID:
XP_036225929
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MQHHAHVARTAPPHLRAHHMAVPPPHTQSQRHISQMNLAHVPAPPLNGQQQQQTSQQMQT
QHLSNGPATASTAAVITGSSIAVASHVRDHHTARLNQQPLQQQHQHPSSMHTSTQLQKLR
QQHQHINNNNNNNSTNKNNYHHHQAQQQYNNNASNTHGNALPVQAAIQQQQQQPKQSTQV
PHHTSRHHQQQQQHQLHHQQQPQPQPQQQQQATQQLQHKHTVAPMPPQQSHGHVKHQQPL
QSTQQQQTVQTTNLVIAKNVINTHVPPPSLPQPQHLQQPPPPPTTLNYYTAGNTQTNNNN
NVHKSKYNNHNNVIAVNGGAGSGVGSGMPPKIILQNPNRVLKARLHASASANNIEVSTVR
PSTGGEETIKASKSGGNIGSSSGNNIVSATDTHVSEAVANNVTTAVAESTARHESIQIVQ
STKQAEAASIESNKENLSSATQNANSSIEVSSSTTTNNNNILSNEDNTVAKNSKEKTPMC
LVNELARYNKITHQYRLTSEKGPAHCKRFTVTLKLGEEEYSAEGFKIKKAQHLAAAEAIE
KTKYKHPVPKVIRRGADSEGSSWRANITPTVELNALAMKLGQQTYYLLDPRQVTPADGMG
PPPDAMMAPRYNVPPPPHTLPPHAIAGGHMLPQHPPPHVRMMDPAYVRRNGPYAAAPPQS
QMHGHPAAGSVMRPRYGAPAQRAYMPKYNQQQRYPLMAPPLMAGGPHNGMLPPPPLPHPQ
HGVMPHRYGMPKVTLVVGKQKFVGLGRTLQQAKHDAAARALEVLKAQAATQLNEELNNSL
EESDNKSPISLVYEIGIQRSLTVHFKVLREEGPAHMKKFVTACVVGTIVTEGEGNGKKIS
KKRAAEKMLEELRKLPPLTPTKSPIKRIKVKTPSKTAAVVDTAAGGSGKSGGNIGERRKR
GSSSIKEKSDGDTEGENPITRLIQLQQNRKEKEPVFELIAKNGNENSRRREFIIEVTAHS
MVARGTGNSKKLAKRNAAQNLLLAMGEKDNAAAELKSTAALAYTQSAVCAESAVTTSVSA
SKEQTTTVLQPIVEAAAAPAIIAAPAVAAEALLDVPLVSTTAGQVPGILILRHNKKHATK
KKESMLSTTTRLAVVEEIENKQEESAIVAIPSNTQTAPAAVPNNAGSCDNQAAAAENTKP
IAEATSAPAVVDSANVASSVNSSACSAPKSKPAGVHTKDQLLYLAKLLGFEVNFSDFPKG
NHSEFLTIVTLSSNPPQICHGMGTSAEESQNDAAKNALKLLSKLGLNNAAN
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcatgcacatgtggcacgtacagcacctccccatttgcgtgcccaccacatg
gcggtgccaccgccgcatacccagtcacagcgtcatatatcacaaatgaatttggcacat
gtgccagcgccgccactaaacggacaacagcaacagcagacgagccagcaaatgcaaaca
caacatctcagtaatggtcctgcaaccgctagtactgctgcagtgatcaccggctcgtcc
atcgccgtggcgtcacatgtacgcgatcatcatacagcacgtttgaatcagcaaccattg
caacaacaacatcagcatccctcatctatgcacaccagtacgcagctgcaaaagctgcga
caacaacatcagcatataaacaacaacaataataataatagtacaaacaagaacaactat
catcatcatcaagcgcagcagcaatacaataacaacgccagcaatacgcacggcaatgcc
ttgccggtacaagcagcaatacaacaacagcaacaacaaccaaagcaaagcacacaggtg
ccacatcatacgtcgcggcaccaccaacagcagcagcagcatcaactgcatcatcaacaa
caaccacaaccacaaccacaacaacagcaacaagcaactcaacagctgcaacataagcat
acagtggcgccaatgccaccacagcagtcgcacgggcatgtaaagcaccaacagccgttg
caatcaacacaacaacaacaaacagtacaaacaacaaatctggttattgcaaagaatgtc
atcaatacacatgtgccaccaccgtcgctgccacagccacaacatctgcagcaaccacca
ccaccacctacgactttgaactactacactgccggtaacacgcaaacaaacaacaacaat
aatgtgcataaatctaaatacaataaccataataacgttattgccgtcaatggtggcgct
ggcagcggtgttggcagtggcatgccaccaaaaatcatattgcagaatccaaatcgcgtg
ctgaaagcgcggctgcatgcaagcgcgtcagcgaataatattgaagtgagtactgtgaga
ccttcgacgggcggggaggaaactattaaagcctctaagtctggtggcaatattggcagc
agcagcggcaacaatattgttagcgccaccgatacacacgtgagtgaagctgttgctaat
aacgtgaccacagctgtagccgaaagcacagcgaggcatgagagtatacaaatcgtgcaa
agcactaagcaagcagaggctgcctccatcgagtctaataaggaaaatctgtctagtgca
acacaaaatgcaaactcaagcattgaagtgagcagcagcactacgacaaacaacaacaac
atcttgtccaatgaagacaacacagtggcgaaaaattcgaaagagaaaacaccaatgtgc
ttggtcaacgaattggcgcgttacaacaaaatcacacatcaataccgcttaaccagcgaa
aagggaccggcgcattgtaagcgctttacggtcacactgaaattgggtgaggaggagtat
tcggctgagggtttcaaaataaagaaagcccaacatttggcagctgctgaggctattgaa
aagactaaatacaaacaccccgttccgaaggtgatacgccgcggcgccgatagtgagggg
agttcatggcgtgccaacatcacgcccacagtggagttgaatgcgctcgccatgaaattg
ggtcaacagacctattatctcctagatccacgacaagttacaccggccgatggaatggga
ccaccaccagatgctatgatggcaccgcgttacaatgtgccgccgccaccacacacgctg
ccaccgcacgccatagccggtggtcatatgctaccacagcatccaccaccgcacgtgcgt
atgatggatccggcatatgtgcgtcgcaacggtccgtatgccgcagcgccaccacaatcg
cagatgcacggacatcccgctgccggctcggttatgcgtccacgttatggtgcgccagca
cagcgtgcatatatgcccaagtataatcaacagcaacgttatccactaatggcgccaccg
cttatggctggcggtccacataacggtatgctgccaccgccacctttgccacacccacaa
catggcgtcatgccacatcgttatggcatgcccaaggtgacactagtcgtgggtaagcag
aaatttgtagggctgggccgtacattgcagcaagccaagcacgatgccgcggcgcgtgcc
ctggaagtgctcaaagcgcaggccgccacacagctcaatgaagagctcaacaacagtctg
gaggaaagcgataacaaatcaccgatctcgctggtttatgagatcggcatacaacgcagc
ctaacggtacacttcaaggtactccgcgaagagggtccagcgcacatgaagaaatttgtt
actgcttgcgtggtgggcaccatagtaacagagggtgagggtaacggcaagaagatatcg
aagaaacgcgctgcggaaaagatgctggaggagctaaggaaactaccaccactaacgccc
accaagtcgcccataaagcgcatcaaagtcaaaacgccaagcaaaacagcagccgttgtg
gacaccgctgcgggtggtagcggcaaatcgggtggcaacattggtgagcgccgaaaacgt
ggcagtagttcgatcaaagagaaaagtgatggcgataccgagggagagaaccccatcacg
cggctcatacaattgcagcaaaatcgcaaagagaaagagccagttttcgagttgatagcg
aaaaacggcaatgaaaactcgcgtagacgcgaattcattatcgaagtgacggcgcacagc
atggtcgcacgtggcactggcaacagcaagaagctggccaagcgcaatgccgcccaaaat
ttacttttggccatgggcgaaaaagacaacgcggccgctgaactgaagtccaccgcagcg
ctagcttacacacagtctgccgtttgtgcggaatcagcagtaacaacaagcgtatcggcc
agtaaagagcaaaccactacagtattgcagccaattgttgaagcagctgcagcgccagca
atcatcgcagcgccagcagttgcagctgaagctctgcttgatgtgccacttgtatccacc
actgctgggcaagtgccaggcattctaatactgcgtcataacaagaaacatgcaacaaag
aaaaaagaaagcatgctaagtactacaacacgtctagcggtggttgaggaaattgaaaac
aagcaagaggaatcagcaattgtcgccataccatcgaatacgcaaacggcacctgcggcg
gtaccaaacaatgcaggcagctgtgacaatcaagcagcagccgctgaaaacactaaaccc
attgctgaagctacttccgctccggctgtggtcgattcggctaatgtcgctagcagcgtc
aacagcagtgcctgcagcgcgcccaagtcgaaaccggcaggcgtgcacactaaagatcaa
ttgttgtatctggcaaaattgctgggttttgaggtgaacttttccgattttccaaaggga
aatcacagcgaattcctaacgatcgtaacgctttcctccaatccaccgcaaatctgtcat
ggtatgggcacaagcgcagaggaatctcaaaatgatgcggctaaaaatgcattaaaactt
cttagtaaattaggcttgaataatgcggcgaattaa
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