Brassica oleracea (wild cabbage): 106292492
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Entry
106292492 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106292492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106292492
03036 Chromosome and associated proteins [BR:
boe03036
]
106292492
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106292492
Coactivators
SAGA/TFTC/STAGA complex
106292492
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106292492
STAGA complex
106292492
TFTC complex
106292492
SAGA complex
106292492
SLIK complex
106292492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
106292492
NCBI-ProteinID:
XP_013583547
UniProt:
A0A0D3CLJ0
LinkDB
All DBs
Position
C5:42989668..42992605
Genome browser
AA seq
527 aa
AA seq
DB search
MEQPRQTSTASQPPETPSQPSEPAPKPAVLSQIQQPPSTNPNPSSAPSIPSSPSPPSPSL
NPNPNPPQYTRPVTSPATQHLPQSLGRPPPPSYSRPWQPHSSYAHFSSSASSSPLLSSSS
APASSSSSSSLPVAGQQRGGMAIGVPASPIPSPSPTPASAFPGSFGQQYGGLGRGTVGMS
EASSNSSVTQGRMMQGTQGMGMMGTIGSGSQMRPSGMPQHQQRPAQSSLRPASSPSSPSP
VPQNFQGHSLMRPSSIGSPGVQSTGAANQPWLSSSAQGKPPLAPPSYRPQVNNPSMPQRS
HVPQQHLSTSPAASQPQQQQQHQLQPQEQHQQLRSPHQPLPYSHQPPRVQGSVNQKAASL
AMPTQPPVPQPGNQAKTVSTENEESDDRILGKRSIHELLQQIDPSEKLDPEVEGILADIA
EDFVESITTFGCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSDEIKTFRKPVTTDIH
KDRLAAVKKSMTVTEAANARFGHGTANARGGQAKTPANPLASTTFNH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccccggcaaacctcgacggcgtctcagccaccggaaacaccctctcaaccg
tcggagccagctccaaaaccggcggttttatcccagattcagcaacctccttccaccaat
ccgaatccctcctccgcgccctctattccctcttctccatccccgccgtcgccgtcgctc
aatccaaaccctaatccacctcaatacacacgtccggtgacatctccggcgacgcaacac
ctcccccagtctctgggtcgtcctcctccgccgtcgtactcgagaccgtggcaaccgcat
tcctcatacgctcacttctcctcctccgcgtcgtcgtctccgttgctatcttcctcgtcg
gctccggcctcttcgtcttcttcctcttccttgcctgttgctggacagcaaagaggcggt
atggcgatcggcgttccagcttctccgatcccgagcccctctccgactccggcgtctgct
tttccgggatcttttgggcagcagtacggcggattgggtcgtggaactgtcggaatgtcg
gaagcgagttccaattcaagtgtcacgcagggtaggatgatgcaaggaacgcaggggatg
ggaatgatggggactattggctcaggttctcaaatgcggccaagtgggatgcctcagcac
cagcagaggccggctcaatcctctctaaggccagcttcctctccgagtagtccatctcct
gttccccaaaactttcaagggcatagcctaatgagaccttcatctattggttctcctggt
gtccaatccaccggtgcagcaaatcaaccgtggttatcatcttctgcccaagggaagcct
cctttggcacccccttcgtatagaccgcaagtaaataatccctccatgccacaaagatcc
catgttcctcagcaacatctttccacgtcaccagcggcttcacagcctcagcaacaacaa
caacatcagcttcagcctcaagagcaacatcaacagttgagatctccgcatcagccttta
ccttactcacatcaaccgccccgggtccaagggtcggtgaatcagaaggctgcttctctg
gcaatgccgacccagccccctgtgcctcaaccaggaaaccaagctaaaacagtttcaaca
gagaatgaggagtctgatgatcgtattctgggaaaaagaagcatccatgagctacttcag
cagattgatccgtcagagaaactggatccagaggttgaaggcatccttgctgatattgct
gaagactttgtggagtcaatcacaacttttggctgttctttagccaagcatagaaagtca
gatactctagaggccaaagacatcttgctccatgttgaaagaaactggaatatcaggcct
cctggttttagcagtgacgagatcaagacatttagaaagccagtgacaacagatattcac
aaagatagacttgccgctgtaaagaagtctatgacggtaacggaagcagcaaacgccagg
ttcgggcacgggacggctaatgcaagaggaggccaggcaaagacgcctgctaatccattg
gcctctacaactttcaatcactaa
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