Brassica oleracea (wild cabbage): 106305964
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Entry
106305964 CDS
T04124
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106305964
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106305964
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106305964
03036 Chromosome and associated proteins [BR:
boe03036
]
106305964
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106305964
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106305964
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106305964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
106305964
NCBI-ProteinID:
XP_013597856
UniProt:
A0A0D3DC99
LinkDB
All DBs
Position
C7:complement(35701128..35705060)
Genome browser
AA seq
538 aa
AA seq
DB search
MLDVVAPGDMASLDADLLQLQEMSTFVLKSRPEFTQKLFDQWLSLPEAHRQVASLLQDAV
AGAPLNVPGSASGSGPGTSNSLPSMFPAGSAPPLSPRSCGSPRTMKQRAPSNLGSPLKVL
NEPVKESIPQFYFQNGRPPPSEIKEQCMFRVNHFFYGHTDGLQIQEFKLVTREICKLPSF
FSTSLFRKIDVNNTGFVTREAFIDYWVNGNMLIMDKTTQIFKILKQQNQNFLVKDDFKPL
LKELLATHPGLEFLQGTPEFQERYAETVTYRIFYYINRSGNGRLTFRELKRGNLIDAMLH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMKYGNHALTYRIVDRIFS
QVARKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGILTRNEMQFFYE
EQLHRMECMAQEAVLFEDILCQLIDMIGPEDESYITLNDLKGSKLSGNVFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgtggttgctcccggagacatggcttctctcgacgccgatttgctccagctg
caggagatgtccacgtttgtcctgaaatcgagacccgaattcactcagaagctattcgat
cagtggctttctctccccgaagctcatcgtcaggttgcatcgttgcttcaagatgcagta
gctggagctcctttgaatgttcctgggagtgcatctggttcaggtcctggcaccagcaac
tcgttaccgtccatgtttcctgcgggaagtgctcctccgctttcaccaagaagctgcggt
tcgcctcgtacgatgaaacagagggccccttctaatttaggctctccgttgaaagtactc
aacgagcctgttaaggagtcgatacctcagttttattttcaaaatggccgtccacctcca
agcgagataaaagagcaatgtatgtttagagtcaaccactttttctacggccacacggat
ggactgcaaatacaagaattcaaattagtcacccgtgagatctgcaagcttccatctttc
ttctccacgtcactttttaggaagatcgatgtcaataacacaggttttgttaccagggaa
gcatttattgattattgggtaaacgggaacatgttgataatggataaaactacccaaata
ttcaagatactaaagcagcaaaatcagaatttccttgtgaaggatgactttaagccacta
cttaaagaacttttggccacacatcctgggcttgaatttttgcaaggcacacctgaattc
caagaaagatatgctgaaactgttacatacagaatattttactacataaatagatctgga
aacggtcgacttacatttagggagctgaaacgtggaaatttaatcgatgctatgcttcat
gctgatgaagaagaagatatcaacaaagtgttacggtacttctcatacgagcatttctat
gtcatatactgcaagttctgggagctcgatactgaccatgatttcctgattgacaaagaa
aaccttatgaaatatggcaaccatgctcttacttaccggattgtcgacagaatattctcc
caggttgctaggaagttcactagcaaagttgaagggaaaatggggtatgaggattttgtc
tatttcatacttgccgaagaagataaatcgtcagagcctagccttgaatattggtttaag
tgcattgacttggatgcaaatgggattcttacgcgaaacgagatgcaattcttttatgag
gagcagttacatcgcatggagtgtatggcgcaagaggctgttctttttgaggatatacta
tgtcagctaattgatatgatcggaccagaggatgaaagctatataactctgaatgacctg
aagggctccaaactatctggaaacgtcttcaacatcctttttaatcttaataaatttatg
gcatttgagacgcgggatcccttcctcattcgtcaggagcgtgagaaccctacattgaca
gagtgggaccgttttgcacatagagagtacataaggctctcaatggaagaagatgttgaa
gatgcatccaatggaagtgctgaggtttgggatgagtcattggaggctcctttctga
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