Brassica oleracea (wild cabbage): 106317379
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Entry
106317379 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: disease resistance protein TAO1-like
Organism
boe
Brassica oleracea (wild cabbage)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
C-JID
LRR_4
TIR_2
LRR_3
NB-ARC
LRR_8
AAA_16
AAA
AAA_22
nSTAND1
AAA_18
nSTAND3
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
106317379
NCBI-ProteinID:
XP_013610662
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Position
C9:46674814..46681128
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AA seq
1412 aa
AA seq
DB search
MDSSSSSLTWTHDVFPSFCGGDVRKGFLSHLKKELGNKGIKTFNDDGIDRGKHIGPELVK
AIRESRIAIVLLSPNYASSSWCLDELVEIMKDRVKEPYELEESMEGRVKEPDELEEIMEG
SERNQLKVITIFYGVNPTDVRKQTGDFGKAFNITCVGKEEKKVKAWRQALVDVANIAGYD
SSRWHSEADLINKIAVYLMKVLGLTPSKDFDHFVGMEARITEIKCLLSQQSDAKVKFIGI
VGPAGIGKTSTAKALYDRLSPDFAFSTFIEDIRGSKEMPVLGGSHHQFQLDWQKELLSRL
FDQTDSKVGHLGVAEQRLRGKKVLIVLDEMDCLFKLEAMAKKADWFGPGSVIIITTEDRK
LLKAQRIECIYNMRLPNQVEAMQILCQYAFVHKSLDYGPATIIARALHNQYSLDIRGFEI
FCQYAFDQKSLDYGPEMRTVKPLRNQFYLDIRKSIEMSSLPGSDYQLDYLYDFYKLAQEV
TKLAGRLPLALRVLGSSLRGMSRDEWRNAVPRLKSEGIESILMFGYNGLPCDRDRTLFLY
IACFCVGFKVDRLKSLLEDCDLDVGHGLHNLEQKSLIYTESGYDPYRYVKMHKLLQQMGR
EIVKKESLKEPGKRQFLMDAKDISELLEDEDAGTGEILGIMLDRWGREDIQISKSAFKGM
KNLQLLVIDSKTVRIPEGLSCLPDKLRLLEWPRCPLTFLPSKFSGKFLVELIMTDSKLEK
LWDGIKPLQRLKRLVLSNCKYLKEIPDLTNATSLEELVLSECIRLLELTSTIGNATKLKR
CILSRCFLLKDLPSSMSRLINLEKLDLTQCTGWKDGWSSLQKLRGCSSLKEVDLSWSAIW
EVPSSIRSNWPCLKKLDMSGCRNLKEFPNVPDSIEELVLCKTRIKEIPPSIENLSRLRKL
IMFGCKNLEKISPNISKLENLEFLGLRKSGQSEHDKVDLIDVFEAVIKWEGPDSKRSWRL
LSDFEVHYLLPRCLPTKKALSLWLRSYDIYTISDCITCLSGLIKLDVTECPYLEALPPLP
DSLLYIDAEDCLYLKRIDSSFHNPNICLNFAGCYGLSRNARRPIHTSDCKYVLLPGEEVP
ALFPHQADSGSLTINLTPRPLPSSLRFKACILLSTCNTSMSVVLMMGGVTCRVIGKQNDL
TMQYGSNQHHMPCKRLVYEDHLYIFEDSLCLNQDFPDEAGEATLSELLFEFLFHGNIWKV
KGCGVRLLFPDSIIDSQXYGNKVESDESTLVPGVEVPAHFTYRATSGFLKINQTPGPLPP
SLRFKACILLSRVNINLVDDEDIVSWSLNYLFDDVDDHGEEKQLSMCVSCRFRGKQKGLT
VQYGSNQRDMPYICGWEERLYTFEDSSCLDQDCPEAEEATFSELVFHFKVFYKKWKVKDC
GVQLLEDEEESGRDEDEDDKAGDGDNDGVEEI
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcttcttcttctctcacttggacgcatgatgtcttcccgagcttctgtgga
ggagacgtgcgcaaaggctttcttagtcaccttaaaaaagagctcggaaataagggaatc
aaaactttcaatgatgacgggattgatcgaggcaaacatatcggccccgagctcgtaaaa
gcgatcagagaatcaaggattgccattgtcttgctctcccctaactacgcttcttcaagc
tggtgtttggatgagttggtggagatcatgaaggacagggtaaaggagccatatgagttg
gaggaaagcatggagggcagggtaaaggagccagatgagttggaggaaatcatggagggc
agcgaaaggaatcaactaaaagtgataaccattttctatggagtgaatccaactgatgtt
aggaagcagaccggagatttcggaaaggcctttaacataacctgtgtgggaaaagaagaa
aagaaggtgaaggcatggagacaagctttggtggatgtagccaatatagctggttatgac
tctagcagatggcacagtgaagctgatttgatcaacaaaattgccgtatatcttatgaaa
gtgttggggcttacaccatcaaaagattttgatcactttgttggcatggaagctcgtatc
acggagataaagtgcttgttgagccaacaatctgatgctaaagttaagttcatagggatc
gtgggtcctgctgggattggtaagacgagcactgccaaagctttgtacgaccggttatct
cctgattttgcgttcagcacgtttattgaggatatcagaggaagtaaagagatgcctgtt
ctcggtggctcccatcatcaatttcagttggattggcagaaagagttactgtctcggctt
ttcgaccaaacggatagtaaggttggtcatttgggagtggctgagcaaaggctgagaggc
aaaaaagtgttgattgttcttgatgaaatggattgcttgttcaaactagaggcaatggca
aaaaaggctgattggtttggacccggaagtgttattatcattacaaccgaagatagaaaa
cttctcaaggcacaacgcatcgaatgtatttacaatatgagacttccaaatcaagttgag
gcaatgcagatcttatgccaatatgcttttgttcacaagtctctagattatggtcctgcg
acgataattgccagagctttgcacaaccaatactctcttgatatcagaggatttgagatc
ttctgccaatatgctttcgatcaaaagtctctagattatggtcctgagatgagaactgtc
aaacctttgcgaaaccaattctatcttgatatcagaaaaagtattgagatgtcctctctc
cctggctccgattatcagttggattatctgtatgatttttataagctggctcaggaagtt
actaaacttgctggtcgtcttcctctggccctgagagtcttgggatcgtctctacgagga
atgtccagggacgagtggagaaatgcagtaccaaggctcaagtcggaaggaattgaatca
attctaatgtttggctacaacggcttaccttgtgatagagaccgaactctttttctgtat
attgcatgtttctgtgttggtttcaaagttgatcgccttaaaagtcttcttgaagattgt
gatttggatgtcggccatgggcttcataacttggagcagaaaagtctcatatacacagaa
tccggatacgatccatacagatacgtaaagatgcacaaattactgcaacaaatgggtaga
gaaattgtcaaaaaagagtctttgaaggagcctggaaagcgacagttcttgatggatgca
aaggatatttctgaattacttgaagatgaagatgctggtactggagaaattctaggcata
atgttagacagatggggaagggaggatatccaaataagtaaaagtgccttcaaagggatg
aagaatctccagctcctagtaatcgactctaagaccgtgcgcatacctgaaggcctcagc
tgtcttcccgacaaactcagacttctagagtggcccagatgtccattgacatttttgcct
tccaagttctctggcaagtttcttgttgaacttatcatgacagacagcaaacttgagaag
ctttgggatggaattaagcctctccagcgactcaagcggttggttttgagtaactgtaag
tatctgaaagagattccagatctcacaaatgcaacgagtctcgaggaactagttctctcc
gagtgcatacgtttgttagagctcacaagcactattggcaatgccactaagctaaaaagg
tgcatacttagccgttgctttcttttgaaggatctcccctcttctatgagtaggttaatc
aatctcgagaaactggacctcactcagtgcacgggttggaaagatggttggtcaagtctg
caaaaactccgtggttgctcgagtttgaaagaagtcgatctgagctggagtgcgatatgg
gaagtgccatcatcaatcagatctaattggccttgtcttaagaaattggatatgtctggg
tgtagaaacctcaaggagttcccaaatgttcctgacagcattgaagagttggtattgtgc
aagacaaggataaaggaaattcctccatcgattgagaatctgtctcgtctgcgtaaacta
attatgtttggatgcaagaatctggaaaagatatctcccaatatttctaagttggagaat
cttgagtttcttggtctgcgaaaaagtggccaaagtgagcatgataaggtggatcttatt
gatgtatttgaagcagtaatcaagtgggagggccctgactcgaagcgcagttggagatta
ctatcagacttcgaagttcactaccttttaccgagatgtctacccacgaagaaggcgcta
tcattatggttacggagttatgatatctacactatttcagattgcatcacatgtctctca
gggctcatcaagcttgacgtcacagaatgcccttatctcgaagcacttccaccgcttcca
gactcacttctatatatagatgcagaagactgtttatacttgaagagaatagactcttct
tttcataatccaaatatttgcctaaactttgctggctgttatggcctgagtcgaaacgcg
agaaggcccatccacacatcagactgcaaatatgtgttattaccgggtgaagaagtgcct
gcactcttccctcaccaagctgactcaggttccctgacaatcaatctgactccaagacct
cttccttcatccttgagattcaaagcttgcatcttgctgtcaacatgcaatacttccatg
tctgtggttctaatgatgggtggtgtgacttgtcgtgtcataggtaaacagaatgatctc
actatgcaatatggatcaaatcagcaccatatgccgtgtaaacgtttagtctatgaagac
catctgtatatatttgaagattctttatgtctaaaccaggatttccctgatgaagccgga
gaagccaccttgagcgagcttctgtttgagttcctgttccatggtaacatctggaaggtg
aaaggctgcggtgtacgacttttgttccctgattctattattgacagccaatgatatggg
aacaaagttgaaagtgatgaatctacgctcgtacctggtgtagaagtgcctgcacacttc
acttaccgagctacttcaggtttcctaaagatcaatcagactccaggacctcttcctcca
tcccttagattcaaagcttgcatattgctctcaagagtcaatattaatctcgtggatgat
gaagacattgtctcttggagccttaattatttatttgatgacgttgatgaccatggagag
gagaagcagttatcgatgtgtgtgtcttgtaggtttaggggcaaacagaagggcctcact
gtccaatatggatcaaatcagcgcgacatgccttatatatgtggatgggaggaacgtctg
tatacatttgaagattcttcttgtctagaccaggattgccctgaagctgaagaagccact
ttcagtgagcttgtgtttcacttcaaagtgttttataagaaatggaaagtgaaagattgt
ggtgtacagcttttggaggacgaagaagaatctggacgtgatgaggatgaggatgataaa
gctggcgatggtgataatgatggggttgaggagatataa
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integrated database retrieval system
