Brassica oleracea (wild cabbage): 106323707
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Entry
106323707 CDS
T04124
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106323707
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106323707
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106323707
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
106323707
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
106323707
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106323707
Prokaryotic type
106323707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
Lyase_aromatic
tRNA-synt_2
HGTP_anticodon2
tRNA-synt_2b
Imm68
Motif
Other DBs
NCBI-GeneID:
106323707
NCBI-ProteinID:
XP_013617244
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Position
C1:complement(43325020..43328048)
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AA seq
856 aa
AA seq
DB search
MAAERRSVITLGGKGSSFSSSSVYKIAFGVANVRIDSSAIERLSTKPLPLIKGSSFSIPE
ELTKEETRASLVVLLNKLLLANSGSVRSVLPVKIMEIVNSKDETFEFGEVEVTEGESVVL
EKSCATLVGICSVIDHKSTVLSQIVDSVAALSCEATKGDITSFSSLDSGDGFGNKDAISV
AGDLKVLLNGSKAVGKFEIEEISKIPRIHGKFRDVVRSVHSDARVELNSGVKGCGVGEAL
GATLSALCVPIKSLGECSFLRAKLCFESIVNEDLRELLLEKSCVEYENLKSGVKLALVEE
DPCRLAHKLNECLGIVWRIIGLEAAAAYFALAGGDLFATKEVLKGDKKKKAVLGKGTSVI
IQFIKERLVSSNEAANGGDQVEQILYLYNPESHGFDCLLAKVKEIVESNENRRLPKLPKG
TRDFAQGKMIIREKAFSIIQNVFKKHGATALDTPVFELRETLMGKYGEDSKLIYDLADQG
GELCSLRYDLTVPFARYCAMNGISSIKRYQIAKVYRRDNPSHGRYREFYQCDFDIAGLSE
PMGPDFEVVKILTELLDKLEIGDYVVKLNHRKLLDGMLEICGVPAEKFRTICSSIDKLDK
QSFEQVKKEMVEEKGLSSEVADRIGSFVKEKGAPMELLNKLREEGSEFLGNKSTKEALDE
LSIMFEALERSKCSGRVVFDLSLARGLDYYTGVIFEAVCIGAEVGSIAAGGRYDNLIGMF
GKEQVPAVGMSLGIERVFNILEKKQKLEERKTRVVQSTETQVLVSIMEDNKLGEAAELAS
QLWEADINAEYLVNKRRGKHFDRAMSTGSEIPWMVIVGKTELSEGVVTLKKILKGSEEEV
PGVPRDSFVAELLKRL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaggagatcggtgattactctgggaggaaaaggatcatccttttcttct
tcctccgtttacaagatcgctttcggcgtcgctaacgtacgaatcgactcttctgcgatc
gagagactctccactaaaccccttccattgatcaaaggaagctcctttagtatccccgaa
gagttaacgaaggaagagacccgagcttctttggttgtgctcttaaacaagcttcttttg
gcaaactccggttcggttcggtctgttcttccggttaagataatggagattgtgaattca
aaggatgagactttcgagtttggtgaggtggaagtgacggaaggggagagtgtcgtgttg
gagaagtcttgtgccacgctggttgggatatgttcggttatagatcacaagtcaacggtt
ttgtcgcagattgttgactctgttgctgccttgagctgtgaggctactaaaggtgacatc
acttcgttcagctcgttggattctggagatgggtttggtaataaagatgcgatcagtgtc
gctggtgatctcaaggttttgctgaatgggtctaaagctgttgggaagtttgagatcgaa
gagatttcgaagataccgaggattcatgggaagttcagagacgtggtgaggagcgtgcac
tcggatgctcgggttgagttgaactcaggtgttaaaggatgtggagttggtgaggctttg
ggagctacgttgtcagctttgtgtgtgccgattaaaagcttgggagaatgttcgttcctt
cgtgctaagctgtgtttcgagtccattgtaaatgaggatctgagggaactgctcttggaa
aagagctgtgttgagtatgagaatctgaagagcggtgttaagttagctctcgtggaagag
gatccctgcagattggctcataagttgaatgagtgtttggggattgtgtggagaatcatt
ggtttggaagcagctgccgcctattttgcacttgctggtggagacttgtttgcaactaaa
gaggtgttgaagggagataagaagaagaaagcagttttggggaaggggacaagcgtcatt
atccagtttatcaaagagagattggtgagtagtaatgaggcagcaaatggtggtgaccag
gtggagcaaatcttgtatctttataatccggagagtcacggttttgattgcttgttggct
aaagtgaaagagattgtagaaagtaatgagaacaggagacttcccaagcttccaaagggt
actcgagattttgctcaaggaaagatgataatccgagaaaaagcattttcaatcatacag
aatgttttcaagaaacatggtgcaactgcacttgacactcctgtctttgagctaagagag
acacttatggggaaatatggagaagactcaaagctgatctacgatcttgctgatcagggt
ggagagctatgctctttaagatatgatttaactgttccatttgcacggtattgtgctatg
aatggtatctcatcgatcaaaagataccaaatagcaaaggtgtacagaagagacaatcca
tctcacgggaggtacagagagttttatcagtgtgatttcgacatcgctggtttgtctgaa
ccaatgggacctgatttcgaagttgtcaagattttaactgagctcctagataaattggag
attggagactatgtggtgaaactgaaccacagaaagttgcttgatgggatgctggagata
tgcggagtaccagctgagaaattcaggaccatatgctcgagtatcgataagttagacaag
caatcatttgagcaagtgaagaaggagatggtggaggagaagggtttgtcttcagaggtt
gcagacagaatcggcagctttgtcaaggagaaaggagctcctatggagctgttgaataaa
ctgagagaagaagggagcgagtttttaggtaacaagtcaacgaaagaagctcttgatgag
ttgagtataatgtttgaagctctcgagagatcaaagtgcagtgggagagtagtgtttgat
ctaagtctagctagaggtcttgattattacaccggggtcatctttgaagccgtttgtata
ggagctgaggttggatcaattgctgctggtggtcgatacgataaccttataggaatgttt
ggaaaagagcaagtccctgcggttggcatgagcctggggatcgagagagtgtttaacata
ttggaaaagaaacaaaaactggaagagagaaaaacacgagttgttcaatctaccgagaca
caggttttggtaagtataatggaggataataagctaggtgaagctgcagaactggctagt
cagttatgggaagctgatatcaatgcagagtatcttgtgaacaaacggagaggaaagcat
tttgatcgtgctatgagcacgggttctgagattccttggatggtgatcgtaggcaagaca
gaactcagtgaaggtgttgtaacattgaagaagatcctcaagggaagtgaggaggaagtt
ccaggagttcctagagacagttttgttgcagaactgttgaaacgtctctga
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