Brassica oleracea (wild cabbage): 106325348
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Entry
106325348 CDS
T04124
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106325348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106325348
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106325348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
106325348
NCBI-ProteinID:
XP_013618885
UniProt:
A0A0D3AF34
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All DBs
Position
C1:complement(41547499..41550767)
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AA seq
482 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA
EIVITEKHSIDGRLVEAKKAVPRDDQNTVRSNSSSIQGSPGGPGARTRKIFVGGLPSSVT
ESDFKTYFEQFGTPTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV
KRAVPKELSPSPARSPLGAGYSYGVSRVNNLLNGYAQGFSPGAVGGYGLRMDGRFSPVGA
GRTGFANFGSGYGMNVNFDQGLPTGFTGGNSFNGNVDYGRGMSPYYIGNANRFGPGGGYE
GGNGGGGGNSSFFSSVTRNLWGNNGGLNSNSNTYMGGSTSGNNTLSGPFGNWGAPGGGGG
NNGVGNESVKFGYGGNGESGFGLGTRNIGPSKAAPSSSFSSASVANNAGYDGAGLAEFYG
NGAVYSDPTWRSSAPETEGPASFSYGIGGGGGGPSSDVSARSSSPGYVGSYKRQSNRGEP
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgacaatgggaagctgttcatcggcgggatatcgtgggacaccaatgaggaa
cgtctcaaggagtatttcagcagctttggagaagtgatcgaagctgtgatcttgaaagac
cgtaccacgggccgtgcacgtggcttcggctttgtagtcttcgctgatccagctgttgca
gagattgttataaccgaaaaacacagtattgatgggagactggtggaagcgaagaaggct
gttcctagagatgaccagaacacagttaggagcaacagcagcagcatccaaggatcacca
ggcggtccaggagctcgaacaaggaagatattcgttggagggttaccttcatccgtcaca
gaaagcgatttcaagacctatttcgagcagttcgggacacctaccgacgtggttgttatg
tacgaccacaacacacaaaggcctagaggctttggattcataacttatgactcggaggag
gccgttgagaaagtactgctcaagacgttccatgagcttaacggtaagatggttgaagtt
aagcgagctgttccgaaggagttgtctcctagtccagctcgcagccctctcggtgctggt
tacagctatggggttagtagagttaataacctcttgaatgggtatgctcaagggtttagt
ccaggtgcggttggaggctatgggcttagaatggatggtcggtttagtccggttggtgct
gggagaaccgggtttgctaattttggttctggttatgggatgaatgtgaactttgaccaa
gggttgcccacagggttcactggaggtaatagttttaacggaaacgtagactatggaaga
ggaatgagtccttactatattggtaatgcaaaccggtttggtcctgggggtggttatgaa
ggaggcaatggaggaggaggagggaactcgtctttcttcagttcggttacacggaaccta
tggggaaacaacggtggtcttaactcaaactccaatacatacatgggaggatcaacaagt
gggaacaacacactaagcggtccgtttggaaactggggtgctcctggaggaggaggagga
aacaatggtgttggcaacgagagtgtgaagtttggttatggaggaaacggtgaatctggt
tttgggttgggaacaaggaacatagggcctagcaaggcggcaccgtcatcttcattctct
tctgcctctgtagccaacaacgctggttatgatggagcaggacttgctgagttttatggg
aatggtgcagtctatagtgatcccacgtggagatcatcagctcctgagacagaagggcct
gcttctttcagctatgggattggaggaggaggaggaggtccttcttcggatgtgtcagct
agaagttcatctccaggttatgttggcagttacaagaggcaatcaaacagaggcgagcca
tcacggtga
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